Bradyrhizobium brasilense 5G1B: QA635_02130
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Entry
QA635_02130 CDS
T09096
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baut03016
]
QA635_02130 (thpR)
Enzymes [BR:
baut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QA635_02130 (thpR)
Transfer RNA biogenesis [BR:
baut03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QA635_02130 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
WFU33282
LinkDB
All DBs
Position
450026..450562
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AA seq
178 aa
AA seq
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MPRLFTGLEIPADIGQTLSSLRGGLPGARWIDPENYHVTLRFIGDIDGMWANEIATMLFR
VNRKPFEVKLQGLSSFGGRKPRAVVAAVEPSRPLIELQAELERMMQRMGLDPEGRKFTPH
VTLARLHDASSQDVADYLSVRGYFPSRSFLADRFVLFSSRASTGGGPYVVEDSYALCA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctgttcactggactggaaattccggccgatatcggccaaaccctctccagc
ttgcgtggcggccttcccggcgcacgctggatcgatcccgaaaattatcacgtcactttg
cgcttcatcggcgatatcgatggcatgtgggccaacgagatcgcgacgatgttgtttcgg
gtaaaccgcaagccgttcgaggtcaaattgcaaggcctgtcgagcttcggcggacgcaag
ccgcgcgcggtggttgccgccgtcgagccgagccggccgttgatcgaactgcaggccgag
ctcgagcggatgatgcagcggatggggctcgatcccgagggcaggaaattcacgccacat
gtcacactcgcgcgtctgcatgacgcttcgagccaggacgtcgcggattatctgtccgtg
cgcggctacttcccgagccgcagtttcctggcggaccgcttcgtgctgttctcgtcgcgc
gcgtcgacaggcggcggcccctatgtggtcgaggattcctacgcgctctgcgcgtga
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