Bradyrhizobium brasilense 5G1B: QA635_03600
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Entry
QA635_03600 CDS
T09096
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut00300
Lysine biosynthesis
baut01100
Metabolic pathways
baut01120
Microbial metabolism in diverse environments
baut01230
Biosynthesis of amino acids
Module
baut_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QA635_03600 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
baut01002
]
QA635_03600 (dapE)
Enzymes [BR:
baut01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QA635_03600 (dapE)
Peptidases and inhibitors [BR:
baut01002
]
Metallo peptidases
Family M20
QA635_03600 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
KH_Vigilin
Motif
Other DBs
NCBI-ProteinID:
WFU33552
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Position
complement(800593..801759)
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AA seq
388 aa
AA seq
DB search
MSDAVSITRDLVRCPSVTPADAGALGVLESLLKAAGFEVHRVTFSEPGTADVDNLYARIG
SSAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYL
QDHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGETFDHCVLGEPSNVEVLG
DMIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDHGSAQFQASN
LEFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDARLVKACGNRIRAHIDWQ
PSNSNVFVTQPGPFTDLAVAAIEEVTGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQVDERTPVADLEKLTKIYRGVLDRYFA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgccgtctcgattacccgcgatctcgttcgctgcccctccgtcaccccggcc
gacgccggcgcgcttggcgttctcgaaagtctgctgaaagccgccggcttcgaggtccac
cgcgtgaccttctccgagcccggcaccgccgatgtcgacaacctctatgcccgcatcggc
tcttcggcgccgcatatcaccttcgccggccataccgacgtggtgccgcccggcgatgaa
gccgcgtggacgctcggcgcgttctccggcgaagtgaaagacggttatctctatggccgc
ggcgccgtcgacatgaagggcggcatcgcctgcagcgtcgccgcggtgctgcaatatctg
caggaccatggcggcaagccacaagagaatggcaacggctcgatctccttcctgatcacc
ggcgacgaggaagacgtctcgatcaacggcaccgtcaagctgttgaaatggtgcgccgag
cgtggcgagacattcgatcattgcgtgctcggcgagccttcgaatgtcgaagtgctgggc
gacatgatcaagatcggccggcgcggctcgcagtccggcacgcttgtcgtcgatggcgtg
cagggccacgtcgcctatccgcatcgcgcctcgaacccggtgccggatatctcgcggctg
atcgtggcgctgagcgacgagccgctcgatcacggcagcgcgcagttccaggccagcaac
ctcgaattcaccaccgtcgatgtcggcaacaccgcgagcaacgtgatccccggccaggca
cgggcgaagttcaacatccgctacaacgacaaccacacccaggagagcctgcggcagctg
gtcgacgcgcggctggtgaaagcctgcggcaaccggatccgcgcccatatcgattggcaa
ccgtcgaactcgaacgtgttcgtcacccagcccggcccgttcaccgacctcgcggtcgcc
gcgatcgaggaggtcaccggccgcaggccggagctatcgacctccggcggcacctcggac
gcgcgcttcatctcgagctattgcccggtgatcgaattcggcctggtcggccagaccatg
caccaggtcgacgagcgcacgccggtggccgatctggagaagctgacgaagatctatcgc
ggcgtgctggaccggtattttgcttaa
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