Bradyrhizobium brasilense 5G1B: QA635_04650
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Entry
QA635_04650 CDS
T09096
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut03030
DNA replication
baut03410
Base excision repair
baut03420
Nucleotide excision repair
baut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QA635_04650 (polA)
03410 Base excision repair
QA635_04650 (polA)
03420 Nucleotide excision repair
QA635_04650 (polA)
03440 Homologous recombination
QA635_04650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baut03032
]
QA635_04650 (polA)
03400 DNA repair and recombination proteins [BR:
baut03400
]
QA635_04650 (polA)
Enzymes [BR:
baut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QA635_04650 (polA)
DNA replication proteins [BR:
baut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QA635_04650 (polA)
DNA repair and recombination proteins [BR:
baut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QA635_04650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QA635_04650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFU33741
LinkDB
All DBs
Position
complement(1028839..1031874)
Genome browser
AA seq
1011 aa
AA seq
DB search
MPKTASKAPAKPASKTDPKPVAAKATAKGDHVFLVDGSSYIFRAYHALPPLNRKSDGLQV
NAVLGFCNMLWKLLRDMPEDNRPTHLAIVFDKSEITFRNKLYPDYKAHRPPAPDDLIPQF
ALIREAVRAFELPCLEQVGFEADDLIATYARLASERGATTTIVSSDKDLMQLVNDKVVMY
DTMKDRRIGRDEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIIEYGDLD
QLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVELEVPLDDLAVNEPDSRRLIAF
LKAMEFTTLTRRVADYAQIDPANVDADPGNKSGASVFSPLPPSDVTPAPGDAPTSAAPLP
KAKPTGARDDKNSNLKGTPATLAEARGEAIRKIGFDRKTYQAIGSLDQLNAFIARVPDTG
YVAIEAMSESIDPMQGELAGLALALAPNDACYVPLSHRQAGGGAGLFDAGLAPGQIKTAE
ALAALKPLLESVGIQKVGFDVKFTSVMLAQHGITLRNIDDAQLMSYALDAGRGSHALEAL
AERWFGHAVVNYGGLVGSGKGKLTFDQVTIDKASEYAAESADVILRLWRVLKPRLVAERM
TTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAGEPVNVGS
PKQIGDIIFGKMGLPGGSKTKTGAWSTTAQVLDELAEQGHEFPKKILEWRQVSKLKSTYT
DALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFIATPGHKL
VSADYSQIELRLLAEIADVPVLRQAFRDGLDIHAMTASEMFGVPIKDMPSEVRRRAKAIN
FGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETKDFCRRNGYVTTLFGR
KCYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMIRVEDALTEKKLSAQMLLQVH
DELIFEVPDDEVAATLPVVQKVMQDAPFPAVILSLPLQVDARAANNWDEAH
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacagcctccaaagcccccgccaagcccgcatcgaagaccgaccccaagccc
gttgccgccaaggccacggcgaagggcgaccatgtcttcctggtcgacggctcgtcctac
atcttccgcgcctaccacgcgctgccgccgctgaaccgcaaatccgacgggctgcaggtc
aacgccgtgctcggcttctgcaacatgctgtggaagctgctccgcgacatgcccgaggac
aaccggccgacgcatctggcgatcgtgttcgacaagtcggagatcacgttccgcaacaag
ctctaccccgactacaaggcgcaccggcctccggcgcccgacgatttgatcccgcaattc
gcgctgatccgcgaggcggtgcgcgccttcgaactgccctgcctcgagcaggtcggtttc
gaggccgacgatctgatcgcgacctatgcgcggctcgccagcgagcgcggcgcgaccacg
acgatcgtgtcatcggacaaggatctgatgcagctcgtcaacgacaaggtcgtgatgtac
gacacgatgaaggatcgccgcatcggccgcgacgaggtgatcgagaaattcggcgtgccg
ccggagaaggtggtcgaggtgcaggcgctggccggcgattccaccgacaacgtgcccggc
gtgcccggcatcggcatcaagaccgccgcgcagctgatcatcgaatatggcgatctcgat
cagctgctgttccgcgccggcgagatcaagcagccgaagcggcgcgaggcgctgctggag
aacgccgagaaggcgcgcatctcgcgccagctggtgctgctcgacgacaaggtcgagctc
gaagtgccgctcgacgacctcgccgtgaacgagcccgactcgcgccggctgatcgccttc
ctcaaggcgatggagttcaccaccctcacccgccgcgtcgccgactacgcgcagatcgac
ccggccaatgtcgatgctgatcccggcaacaagagcggcgcgagcgtgttctcgccattg
ccgccatccgatgtgacgccggcgcccggagacgccccgacatctgcggcaccgctgccg
aaagccaagccgaccggtgcgcgtgacgacaagaattcaaacctgaagggcacgccggcg
acgctggccgaggcccgtggcgaggcgatccggaaaattggcttcgaccgcaagacgtat
caggcgatcggcagcctcgatcagctcaacgccttcatcgcccgcgtgcccgacaccggc
tatgtcgcgatcgaggcgatgtcggaatcgatcgacccgatgcagggcgagctcgccggc
cttgcgctggcgctggcgccaaacgatgcgtgttacgtcccgctcagccacaggcaggcc
ggcggtggcgcgggcctgttcgatgccggcctcgcacccggccagatcaagacggccgag
gcgctggcggcgctgaagccgctgctggagtccgtcggcatccagaaggtcggcttcgac
gtcaagttcacctcggtgatgctggcgcagcacggaatcacgctgcgcaacatcgacgat
gcgcagctgatgtcctacgcgctcgatgcgggccgcggctcgcatgcgctggaggcgctt
gccgagcgctggttcgggcacgccgtcgttaactacggcggcctcgtcggcagcggcaag
ggcaagctgaccttcgatcaggtcacgatcgacaaggccagcgaatatgcggccgaaagc
gccgacgtgatcctgcggctgtggcgggtgctgaagccgcgtctcgtcgccgagcggatg
acgacggtgtacgagacgctggaacggccgctggtctcggtgctggcgcggatggagcgg
cgcggcatctcgatcgatcgccaggtgctgtcgcggctgtcgggcgatttcgcccagacc
gcagcacgcgtcgaggccgagatccaggagatcgccggcgagccggtcaatgtcggcagc
ccgaagcagatcggcgacatcatcttcggcaagatgggattgcccggcggcagcaagacc
aagaccggcgcgtggtcgaccaccgcgcaggtgctcgacgagctcgccgagcaaggccac
gaattcccgaagaaaatcctggagtggcgccaggtctcgaagctgaaatcgacctatacc
gacgcgctgccgacctacgtcaatccgcagacccatcgcgtccacaccacctacgcgctg
gccgcgaccaccacgggccggctgtcgtcgaacgagccaaatctgcagaacatccctgtt
cgcaccgaggacggccgcaagatccgccgcgccttcatcgcgacgccgggccacaagctg
gtgtcggccgactactcacagatcgagttgcggctgctcgccgagatcgccgacgtgccg
gtgctgcgccaggcattccgcgacgggctcgacattcacgccatgaccgcctccgaaatg
ttcggcgtgccgatcaaggacatgccgagcgaggtgcgccgccgcgccaaggcgatcaat
ttcggcatcatctacggcatctcggcgttcggcctcgccaaccagctcggcatcgcgcgc
gaggaggcctcggcctacatcaagaaatacttcgagcgcttcccgggcatccgcgcctat
atggacgagaccaaggatttctgccgccgcaacggctatgtgacgacgctgttcgggcgc
aagtgctactaccccgacatcaaggcctccaacgcctcggtgcgcgccttcaacgaacgc
gccgccatcaacgcgcgcctgcagggcaccgcggccgacatcatccgccgcgccatgatc
cgcgtcgaggacgcgctcaccgagaagaagctctcggcgcagatgctcttgcaggtgcat
gacgaactgatcttcgaggtgcccgacgacgaggtcgcggcgacgctgccggtggtgcag
aaggtgatgcaggacgcaccgttcccggcggtgatcctgtcgctgccgctgcaggtcgac
gcccgcgccgcgaacaattgggacgaggcgcattag
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