Bradyrhizobium brasilense 5G1B: QA635_18745
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Entry
QA635_18745 CDS
T09096
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QA635_18745 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baut03021
]
QA635_18745 (rpoB)
03400 DNA repair and recombination proteins [BR:
baut03400
]
QA635_18745 (rpoB)
Enzymes [BR:
baut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QA635_18745 (rpoB)
Transcription machinery [BR:
baut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QA635_18745 (rpoB)
DNA repair and recombination proteins [BR:
baut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QA635_18745 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
WFU36335
LinkDB
All DBs
Position
4025143..4029261
Genome browser
AA seq
1372 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPTGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVFARIDRRRKLPVTSLMYALGLDGEQILSTFYKKITYKRT
KDGWRVPFDANRFRGYSTVNDLIDADTGKVVLEAGKKLTVRQARQLQEKGLKALRMSDEE
LVGNYLAEDLVNPKTGEIYAEAGEEITEKSLKVLNEQGYKDLPLLDIDHVNVGAYIRNTL
SADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLEL
DAPDTHRTLRKEDILAVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKIKDGRVTDEVIYLSAMEEGRYRVAQANVPLDAKGRFTDDLVVCRHAGEVLPVTPDKVD
YMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARD
SGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVK
VGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREE
IERLAKDRDDEQAILDRNVYNRLAELLENRQGIAGPKGFKKDTKITRAVLDEYPKSQWWL
FASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRK
IQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGW
ACAGLGKRIGQTIDAYYHKQDLKPLRETLKKIYGEDETIKSLNDNELVELGRNLSHGVPI
ATPVFDGAKEADIEEMLKLAGFDASGQSTVYDGRTGDQFDRKVTMGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKVGPASTSEAAE
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgtacgcaagtttttcggtcacatcaag
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgacgagccgaccggcggtcggctcgacgagggcctgcaggcggtgttccgctcg
gtgttcccgatctcggatttctccggcacttcgatgctcgaattcgtccgctacgagttc
gaacagccgaaatatgacgtcgacgagtgccgccagcgcggcatgaccttcgctgcgccg
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgccaagtcg
gtgaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcgtcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccg
ggcgtgttcttcgaccacgacaagggcaagacccattcgtccggcaagctgctgtttgcc
gcgcgcgtgattccgtatcgtggttcctggctcgacatcgagttcgacgccaaggacatc
gtgttcgcgcgcatcgaccgccgccgcaagctgcccgtgacctcgctgatgtacgcgctc
ggtctcgacggcgagcagatcctgtcgaccttctacaagaagatcacctacaagcggacc
aaggacggatggcgcgtgccgttcgatgccaaccgcttccgcggctattcgaccgtcaac
gacctgatcgacgccgacaccggcaaggtggtgctcgaggccggcaagaagctgaccgtg
cgccaggcgcgccagcttcaggagaagggcctgaaggcgctgcgcatgtcggacgaggag
ctcgtcggcaactatctcgccgaggatctcgtcaacccgaagaccggtgagatctacgcc
gaagccggcgaggagatcaccgagaagtcgctcaaggtgctgaacgagcagggctacaag
gacctgccgctgctcgacatcgatcacgtcaatgtcggcgcctatatccgcaacacgctg
tcggccgacaagaacatgacgcgcgaggacgcgctgttcgacatctaccgcgtgatgcgt
ccgggcgagccgccgacgctggattcggcgcaggcgatgttccagtcgcttttcttcgac
gccgagcgctacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgagctc
gatgcgcccgatacccatcgcacgctgcgcaaggaagacatcctggcggtcatcaagacg
ctggtcgacctgcgcgacggcaagggcgagatcgacgacatcgaccacctcggcaaccgc
cgggtgcgctcggtcggcgagctcatggagaaccagtaccggatcggccttctccgcatg
gagcgcgcgatcaaggagcgcatgtcgagcgtcgatatcgacaccgtgatgccgcaggac
ctgatcaacgccaagcccgcggctgccgcggtgcgcgagttcttcggctcctcgcagctg
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcggcgcctgtcg
gcgcttggcccgggcggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtgcat
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctggcgacgttcgcgcgcgtcaacaagtacggcttcgtcgagacgccctat
cgcaagatcaaggacggccgggtcaccgacgaggtgatctatctgtcggcgatggaagag
ggccgctaccgcgtcgcgcaggccaacgtgccgctcgatgccaagggccgcttcaccgac
gacctcgtggtctgccgtcacgccggcgaagtgctgccggtgacgccggacaaggtcgac
tacatggacgtgtcgccgaagcagctggtttcggtcgccgcggcgctgatcccgttcctc
gagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcggtgccg
ctggttcgcgccgaggcgccgttcgtcggtaccggcatggaaggcgtggtcgcccgcgac
tcgggcgcggcgattgccgcgcgccgctcgggcgtgatcgaccagatcgacgccacccgc
gtcgtgatccgcgccaccgaggatctcgatccgaccaagtcgggcgtcgatatctaccgg
ctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctggtgaag
gtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgatctcggc
gagctcgcgctcggccgcaacgtgctggtcgcgttcatgccgtggaacggctacaacttc
gaagactcgatcctgctctccgagcggatcgtgaaggacgacgtcttcacctcgattcac
atcgaggagttcgaggtgatggcccgcgacaccaagctcggtcctgaggaaatcacccgc
gacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggtatcgtctac
atcggtgcggaagtccgcgccggcgacatcctggtcggcaagatcacgccgaagggcgag
agcccgatgacgccggaagagaagctgctgcgcgccatcttcggcgagaaggcctccgac
gtccgcgacacctcgctgcgcgtgcctccgggcgtgcagggcaccatcgtggaagtccgc
gtgttcaaccgccacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgcgaggag
atcgagcgtctcgccaaggaccgcgacgacgagcaggcgatcctggaccgcaacgtctac
aaccgcctcgccgagctgctggagaaccgccagggcatcgccggcccgaagggcttcaag
aaggataccaagatcacccgcgcggtgctcgacgagtatccgaagtcgcagtggtggctg
ttcgcctcgccgaacgacaagctgatggccgagatcgaggccatgcggaagcagtacgac
gagtcgaagaagggcctcgagcagcgcttcctcgacaaggtcgagaaactgcagcgcggc
gacgagctgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgcaag
atccagcccggcgacaagatggccggccgtcacggcaacaagggtgtggtgtcgaagatc
gttccgatcgaggacatgccgttcctcgaggacggaacgcatgccgacatcgtgctcaat
ccgctcggcgtgccttcgcgcatgaacgtcggtcagatccttgagacccatctcggttgg
gcctgcgccggcctcggcaagcgcatcggccagaccatcgacgcctattatcacaagcag
gatctcaagccgctgcgcgagaccctgaagaagatctacggcgaggatgaaaccatcaag
tcgctgaacgacaacgagctggtcgaactcggccgcaatctgagccacggcgtgccgatc
gcaacgccggtgttcgacggcgccaaggaagccgacattgaggagatgctgaagctcgcg
ggcttcgacgcctccggccagtcgaccgtttatgacggccgtaccggcgatcagttcgat
cgtaaggtgacgatgggctacatctacatgctcaagctgcaccatctcgtggacgacaag
atccacgcgcgttcgatcggtccgtactcgctcgtcacccagcagccgctaggcggcaag
gcgcagttcggcggccagcgcttcggcgaaatggaggtctgggcgctggaagcctacggc
gccgcctacacgctgcaggagatgctgaccgtgaagtcggacgacgtcgccggccgtacc
aaggtgtacgaggcgatcgtgcgcggcgacgacaccttcgaggccggtattccggaatcg
ttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcacaattcc
aaggtgggaccggcgtcgacgtcggaagcggccgagtaa
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