Bradyrhizobium brasilense 5G1B: QA635_23550
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Entry
QA635_23550 CDS
T09096
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
baut
Bradyrhizobium brasilense 5G1B
Pathway
baut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA635_23550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baut03019
]
QA635_23550
03009 Ribosome biogenesis [BR:
baut03009
]
QA635_23550
Enzymes [BR:
baut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QA635_23550
Messenger RNA biogenesis [BR:
baut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QA635_23550
Ribosome biogenesis [BR:
baut03009
]
Prokaryotic type
rRNA processing factors
QA635_23550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
WFU36984
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All DBs
Position
5002713..5005202
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AA seq
829 aa
AA seq
DB search
MVEASAASAAPETVETVEVNHEPERAHEEQIEENAAHADDAPHVASDEVHAAADEHAVAE
YGALAEVVAPETGPGDEAGEDDEEDDGEEGEEEDVVESVGGDDVLEEVPERPFRPRRQYK
IQEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGRYAVLMPNTARGGGISRKITSAQDR
SRLKEVVQDLDVPEGMGIILRTAGASRSKPEIKRDFEYLIRMWETVRDLTLKSQAPTLVY
EEGSLIKRSLRDLYNKEIDEIQVAGEAGYREARDFMKMLMPANVRAVKQYRDGQPLFSRM
GVESQLDAMFSPTVQLRSGGYIVINQTEALVSIDVNSGRATREHHIEDTALKTNLEAAEE
VARQLRLRDLAGLIVIDFIDMDEKRNNRAVERKLSDCLRQDRARIQVGRISHFGLLEMSR
QRIRASVLESSTEPCPQCGGSGHVRSVSSVALQLLRGIEEILMKGATHNLVVRTRTDVAL
YVLNHKRGHLRDLEDSFRVSLSIVADATVHGQQSYIIDRGEQVHTLEAAKALLAAQAAAA
PAQAEEADDEEELFEYEAEIETDETEGLADERAAGDESGSAEGEGDGQRRKRRRRRRGRG
GSEAREGAQQPREDGDLMHVLPEGTEAVAAADAEGDEDEGDEQQGAARDDQAGNGDRRPR
RRGRRGGRRRRGSGGPDDGLAGSISDELSPAATSEASDAVADFDSHDGEPAPSLAQPELV
AEPPEWQPNEVAPAEPVEPVAAPEPETAAASAAEDTAAEGDRAQRRRSTVREKVNFASSP
LPEASAALVQSPAEEAPEPAAATPEPAPAAAAEAPARKGWWSRRFGGGN
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgaagcctccgccgcgtcggccgcgcccgagaccgtcgagacggtcgaggtcaat
catgagcccgagcgcgcccatgaggagcagatcgaagaaaacgccgcgcatgccgacgac
gcgccgcatgtggcttccgacgaggttcacgccgccgccgatgagcacgcggtcgccgaa
tatggcgcgctcgccgaggtggtcgcgcccgagaccgggcctggcgacgaggccggcgaa
gatgacgaagaggatgacggcgaggaaggcgaggaagaggacgtcgtcgagtcagtcggc
ggcgacgacgtgctcgaggaggttccggagcgcccgttccgcccgcgccgccagtacaag
atccaggaagtgatcaagcgccggcaggtgatgctggtgcaggtcgtcaaggaagagcgc
ggcaacaagggcgccgcgctgaccacctatctgtcgctcgccggccgctacgccgtgctg
atgcccaacaccgcgcgcggcggcggcatcagccgcaagatcacctccgcccaggaccgt
tcgcggctgaaggaagtggtgcaggatctcgacgtgcccgagggcatggggatcatcctg
cgcaccgccggcgcctcccgcagcaagccggagatcaagcgcgacttcgaatatctgatc
cggatgtgggaaacggtgcgcgacctgacgctgaagtcgcaggcgccgacgctggtctac
gaggaaggctcgctgatcaagcgctcgctgcgcgacctctacaacaaggagatcgacgag
atccaggtggccggcgaagccggctaccgtgaagcgcgcgacttcatgaagatgctgatg
ccggccaatgtgcgcgcggtgaagcaatatcgcgacggccagccgctgttctcgcgcatg
ggcgtcgaaagtcagctcgacgcgatgttctcgccgaccgtgcagttgcgctccggcggc
tacatcgtgatcaaccagaccgaggcgctggtctcgatcgacgtcaactccggccgcgcc
acgcgcgagcaccatatcgaggacaccgcgctcaagaccaatctggaagcggcggaagaa
gtcgcgcgccaattgcgcctgcgtgacctcgccggcctgatcgtcatcgacttcatcgac
atggacgagaagcgcaacaaccgcgcggtcgagcgcaagctgtccgactgcctgcgccag
gaccgtgcgcggatccaggtcggccgcatctcgcatttcggcctcttggaaatgtcgcgc
cagcgcatccgcgccagcgtgctcgaaagctcgacggagccctgcccgcaatgcggcgga
agcggtcacgtccgctcggtctcgtcggtggcgctgcagctcttgcgcggcatcgaggaa
atcctgatgaagggcgcgacccacaacctggtggtccgcacccgtaccgacgtcgcgctg
tacgtgctcaaccacaagcgcggccatctgcgcgatctcgaagactccttccgggtttcg
ctgtcgatcgtcgcggacgccacggtgcacggccagcagtcctacatcatcgaccgcggt
gagcaggtgcatacgctcgaagcggccaaggcgctgctcgctgcgcaggctgccgctgcg
ccggcccaggccgaagaggccgatgacgaggaagagctgttcgaatacgaggccgagatc
gagaccgacgagaccgaaggcctcgccgacgagcgggcggccggtgatgaatcgggctcc
gccgagggcgaaggcgacggtcagcgccgcaagcggcgccgccggcgtcgcggccgcggc
ggcagcgaggcgcgtgaaggcgcccagcagccgcgcgaggacggcgatctcatgcatgtc
ctgcccgaaggcaccgaggcggttgccgccgccgatgccgaaggcgatgaggacgaaggt
gacgagcagcagggcgctgcccgcgacgaccaggccggcaatggcgatcgccgtccgcgg
cgccgcggacggcgtggcggccgccgccggcgcggcagtggcggaccggatgacggtctc
gccggatcgatctccgatgagttgagcccggcggcgacgtcggaggcctccgacgcagtc
gccgatttcgatagtcatgatggggagccggctccctcgctggcgcagcccgaactggtg
gccgagccgccggagtggcagccgaacgaggtcgcacccgctgagcctgtcgagccggtc
gcggcacccgagcccgaaactgccgcggcgtctgccgccgaggacacggctgccgaaggc
gaccgcgcgcagcgccgccgctcgacggtgcgcgaaaaggtcaacttcgcgtcgagccca
ctgcccgaggcatcagcggcgctggttcagagccccgcggaggaagcccctgagccggcc
gcggctactccagagccggcaccggccgctgcggccgaggctccggcccgcaagggctgg
tggtcgcgccgcttcggcggcggcaactag
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