Bradyrhizobium australafricanum: QA635_38185
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Entry
QA635_38185 CDS
T09096
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
baut
Bradyrhizobium australafricanum
Pathway
baut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QA635_38185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baut03019
]
QA635_38185
Enzymes [BR:
baut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QA635_38185
Messenger RNA biogenesis [BR:
baut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QA635_38185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HEM4
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
WFU32249
LinkDB
All DBs
Position
8247096..8248514
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AA seq
472 aa
AA seq
DB search
MTSFQDFGLADPIARALREENYLTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPI
LHRLLENRVRPQPKSCRVLVLSPTRELSGQILDSFNTYGRHIRLSSTLAIGGVPMGRQVR
SLMQGVEVLVATPGRLLDLVQSNGLKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPIR
RQTLFFSATMPKDIAELAEAMLRDPARVAVTPVASTVDRIAQRAIQVDFAAKPTVLAQLL
KQEPVNRALVFTRTKHGADKVVKSLAKAGIEANAIHGNKSQNHRERTLAAFRSGEIRTLV
ATDIAARGIDVDGVSHVVNFDLPNIPETYVHRIGRTARAGADGVAISLIAGAEEMGYLRD
IERLIRITVPREDRRTQGGREAAAPAQATHPHRGGRSAPRAHNVRGNEAAPGAKGPRRRR
RRGGNNGAPQTSRGESPRPSQAGNSEGIQGVAFLHRESRPNPQSNRNNRPKH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacctcctttcaggatttcggcctcgccgatcccatcgcccgcgcgctccgagaagaa
aattatctcacgccgacccccatccaggcccagaccatcccgctagcccttgccggccgc
gacgtcgtcggcatcgcccagaccggtaccggcaagaccgcctcctttgcgctgccgatc
ctgcatcggctgctcgagaaccgcgtgcgcccgcaacccaagagctgccgcgtgctggtg
ctctcgccgacccgcgagctgtccggacagatcctcgacagcttcaacacctacggccgc
cacatccggctgtcctcgacgctcgccatcggcggcgtgccgatgggccgccaggtccgt
tccctgatgcagggcgtcgaggtgctggtcgccacccccggccgcctgctcgacctcgtg
cagagcaacggtctgaagctcaaccaggtcgagttcctggtgctcgatgaagccgaccgc
atgctcgacatggggttcatcaacgacatccggaaaatcgtcgccaagctgccgatccgg
cgccagacgctgttcttctcggccaccatgcccaaggacatcgccgagctcgccgaggcg
atgctgcgcgaccccgcccgcgtggcggtgacgccggtggcctcgacggtggatcgcatc
gcccagcgcgcgatccaggtcgatttcgcggccaagccgacggttctcgcccaactgctg
aagcaggaaccggtcaaccgcgccctggtcttcacccgcaccaagcacggtgccgacaag
gtggtgaaaagccttgccaaggccggcatcgaggccaatgcgatccacggcaacaagtcg
cagaaccaccgcgagcgcacgctggcggcgttccgttccggcgagatccgcacgctggtg
gcgaccgatatcgccgcccgcggcatcgacgtcgacggcgtcagccacgtggtgaatttc
gacctgcccaatatcccggagacctacgtccaccgcatcggccgcacggcgcgcgccggc
gccgacggcgtcgcgatctcgctgatcgccggtgccgaggagatgggctatctgcgcgat
atcgagcggctgatccggattaccgtgccgcgggaagaccgccgcacacagggcggccgc
gaggccgccgcgccggcgcaggccacccacccgcaccggggcggccgctctgcgccccgt
gcgcataatgtccgtgggaatgaggccgctccgggcgcaaaaggccctcgccgccgccgc
cgtcgaggtggtaataatggcgcgccgcagacgagccggggcgagtcgccgcgtccgtcg
caggccggcaacagcgaaggcattcagggcgtcgccttcttgcatcgcgagagccggccg
aatccgcaatccaaccgcaacaaccgaccgaagcactag
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