KEGG   Bordetella avium: BAV0155
Entry
BAV0155           CDS       T00695                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bav  Bordetella avium
Pathway
bav00300  Lysine biosynthesis
bav00470  D-Amino acid metabolism
bav01100  Metabolic pathways
bav01110  Biosynthesis of secondary metabolites
bav01120  Microbial metabolism in diverse environments
bav01230  Biosynthesis of amino acids
Module
bav_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bav00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BAV0155 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BAV0155 (dapF)
Enzymes [BR:bav01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BAV0155 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase
Other DBs
NCBI-ProteinID: CAJ47761
UniProt: Q2L1A2
LinkDB
Position
complement(158933..159829)
AA seq 298 aa
MGDNPCMIWNFTKMHGAGNDFVVLDGVRQTIDMTPERARALGDRHFGVGADQILLVEPAT
RPDADFRYRIFNNDGSEVEHCGNGARCFVRFVHEQGLSSKNPLRAEIVSGLIVLDEGDDE
QVTVEMGTTRFDPAALPFDVSGLAQRQQGQDTLYVLPLPGGEIELSAVAISNPHAVQVVA
DVDQAPVSEVGAHIESHPRFARRVNAGFMQIQDRHNIRLRVYERGAGETLACGTGACAAV
AAGIRRGLLDSPVRVQTRGGALTIAWNGEQLRMTGPAESVFSGQVDIDKLVLSLALNR
NT seq 897 nt   +upstreamnt  +downstreamnt
atgggtgataatccttgcatgatctggaatttcaccaaaatgcatggcgctggcaacgac
ttcgtcgtgctcgacggcgtgcgtcaaaccatcgacatgaccccggagcgcgcccgcgcc
ctgggtgaccgccatttcggcgtaggcgccgaccagattctgctggtcgaacccgccaca
cgcccggatgccgacttccgctaccgcatcttcaacaatgacggcagcgaggtcgagcac
tgcggcaatggcgctcgctgcttcgtgcgctttgtgcacgagcaaggcctgtccagcaaa
aaccccttgcgcgccgaaatcgtcagcggccttatcgtgctcgacgaaggcgatgacgaa
caagtcaccgtcgagatgggcacgacccgcttcgacccggccgccctgccattcgacgtc
agcggcttggcgcaacgtcagcaaggccaggacaccctctatgtattgccgctgcccggc
ggcgagatcgagctgtcggctgtggcgatctccaacccgcatgccgtgcaggtagtggcc
gacgtcgatcaggccccggtcagcgaagtcggagcacacatcgaatcgcatccgcgcttt
gcgcggcgcgtcaacgccggtttcatgcaaatccaagatcgccacaacatccgtctacgc
gtctacgaacgcggcgcgggtgaaaccctggcctgcggcaccggcgcttgcgcagccgtc
gcggccggcatccgccgtggcctgctcgacagcccggtgcgtgtccaaacccgcggtggc
gcactgaccatcgcctggaacggcgagcaattgcgtatgaccggcccggccgagtccgta
ttcagtggccaggtcgacatcgacaaactggttctttccctggcgctcaaccgctga

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