Bordetella avium: BAV0155
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Entry
BAV0155 CDS
T00695
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bav
Bordetella avium
Pathway
bav00300
Lysine biosynthesis
bav00470
D-Amino acid metabolism
bav01100
Metabolic pathways
bav01110
Biosynthesis of secondary metabolites
bav01120
Microbial metabolism in diverse environments
bav01230
Biosynthesis of amino acids
Module
bav_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BAV0155 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BAV0155 (dapF)
Enzymes [BR:
bav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BAV0155 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CAJ47761
UniProt:
Q2L1A2
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All DBs
Position
complement(158933..159829)
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AA seq
298 aa
AA seq
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MGDNPCMIWNFTKMHGAGNDFVVLDGVRQTIDMTPERARALGDRHFGVGADQILLVEPAT
RPDADFRYRIFNNDGSEVEHCGNGARCFVRFVHEQGLSSKNPLRAEIVSGLIVLDEGDDE
QVTVEMGTTRFDPAALPFDVSGLAQRQQGQDTLYVLPLPGGEIELSAVAISNPHAVQVVA
DVDQAPVSEVGAHIESHPRFARRVNAGFMQIQDRHNIRLRVYERGAGETLACGTGACAAV
AAGIRRGLLDSPVRVQTRGGALTIAWNGEQLRMTGPAESVFSGQVDIDKLVLSLALNR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggtgataatccttgcatgatctggaatttcaccaaaatgcatggcgctggcaacgac
ttcgtcgtgctcgacggcgtgcgtcaaaccatcgacatgaccccggagcgcgcccgcgcc
ctgggtgaccgccatttcggcgtaggcgccgaccagattctgctggtcgaacccgccaca
cgcccggatgccgacttccgctaccgcatcttcaacaatgacggcagcgaggtcgagcac
tgcggcaatggcgctcgctgcttcgtgcgctttgtgcacgagcaaggcctgtccagcaaa
aaccccttgcgcgccgaaatcgtcagcggccttatcgtgctcgacgaaggcgatgacgaa
caagtcaccgtcgagatgggcacgacccgcttcgacccggccgccctgccattcgacgtc
agcggcttggcgcaacgtcagcaaggccaggacaccctctatgtattgccgctgcccggc
ggcgagatcgagctgtcggctgtggcgatctccaacccgcatgccgtgcaggtagtggcc
gacgtcgatcaggccccggtcagcgaagtcggagcacacatcgaatcgcatccgcgcttt
gcgcggcgcgtcaacgccggtttcatgcaaatccaagatcgccacaacatccgtctacgc
gtctacgaacgcggcgcgggtgaaaccctggcctgcggcaccggcgcttgcgcagccgtc
gcggccggcatccgccgtggcctgctcgacagcccggtgcgtgtccaaacccgcggtggc
gcactgaccatcgcctggaacggcgagcaattgcgtatgaccggcccggccgagtccgta
ttcagtggccaggtcgacatcgacaaactggttctttccctggcgctcaaccgctga
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integrated database retrieval system