Bordetella avium: BAV0171
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Entry
BAV0171 CDS
T00695
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
bav
Bordetella avium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Fibrinogen_BP
ResIII
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAJ47777
UniProt:
Q2L0Z2
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Position
complement(174494..176272)
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AA seq
592 aa
AA seq
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MSFADLGLSPTILSAIEATGFSEPTPVQAAAIPRAMAGADLMVSSQTGSGKTAAFMLPAL
NRVAGQSPNKGVGVQILVLTPTRELALQVADATATYGANLPGLRTTTVVGGVPYGAQLKA
LSRRVDVLVATPGRLIDHLKAGRVKLNTVHTLVLDEADRMLDMGFIEDIETIIERLPQSR
QTLLFSATLDGSVARLAEKMMREPERIEIAGHRDKHANITQSLLYADDASHKMRLLDHLL
RDTRLDQAIVFTATKRGADDLADRLSEQGFSAAALHGDMNQRQRTRTLTQLQRGQVRVLV
ATDVAARGIDVQGISHAVNFDLPLQAEDYVHRIGRTGRAGRDGLAYTLAVHSERHKVRRI
EHYIGQTITPETIAGLEPQRSPRPSSGGPRGNGGKRPDGRRFGGDRPQRSFGDRPQGDRP
PRDFGDRPQRSFGDRPQGDRPQRDFGDRPQRSFGDRPQRSFGDRPQRDFGDRPQRSFGDR
PQRDFGDRPQRSFGDRPQRDFGDRPQRSFGDRPQRDFGDRPQRSFGDRPQRDFGDRPQRS
FGDRPQGDRPQRDFGDRPQRSFGDRPQRSFGDRPQRAAPGKRFSKPAGDRRG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgcagacttgggcctctcgcccaccattctctccgcaatcgaagctaccggt
ttctccgagcccacgccggtgcaagctgccgccattccgcgcgccatggctggcgccgat
ctgatggtgtcctcgcaaaccggtagtggaaaaacggccgctttcatgctgcccgccctg
aaccgtgtcgcaggccagtcgcccaacaaaggcgttggcgtgcagatcctggtactgacc
cccacccgcgaactggccttgcaagtggctgacgcaaccgcgacctacggcgccaatttg
ccgggtctgcgcaccacgaccgtggtgggcggcgtgccttacggcgcccagctcaaggcg
ctgtcgcgccgcgttgacgtgctcgtcgccacgcctggccgcctgatcgaccacctgaag
gcgggccgcgtcaaactgaacaccgtgcacacgctggtgctcgacgaagccgaccgcatg
ctcgacatgggcttcatcgaagacatcgaaaccatcatcgaacgtctgccgcaaagccgc
cagaccctgctgttctcggccaccctggacggcagcgtcgcccgcctggccgaaaaaatg
atgcgcgaacccgagcgtatcgaaatcgccggccaccgcgacaaacacgccaacatcacg
caaagcctgctgtacgccgacgacgcctcgcacaagatgcgtctgctggatcacctgctg
cgcgatacgcgcctggaccaagccatcgtctttaccgccaccaagcgcggcgccgacgac
ctggccgaccgtctgagcgaacagggtttctctgccgccgccctgcacggcgacatgaac
caacgccaacgcacccgcaccctgacccagttgcaacgcggccaggttcgcgtgctggtc
gccaccgacgtagccgcccgcggcatcgacgtgcagggcatcagccatgccgtcaacttt
gacctgcccctacaagccgaagattacgtacaccgtatcggccgcaccggccgcgctggc
cgtgacggtctggcttacacgctggccgtgcactccgagcgccataaggttcgccgcatc
gaacactacatcggtcagaccatcacgccggaaaccattgccggcctggaaccgcaacgc
agcccgcgtcccagcagtggcggcccgcgtggcaacggcggcaagcgtcccgatggccga
cgcttcggcggtgatcgcccccaacgtagcttcggcgaccgtccccagggcgatcgtccc
ccgcgcgacttcggtgaccgtcctcaacgcagcttcggtgatcgtccccagggtgatcgc
ccccaacgggacttcggcgatcgtccccagcgtagcttcggcgatcgtccccagcgcagc
ttcggcgaccgtccccaacgcgacttcggcgatcgtccccagcgcagcttcggcgaccgt
ccccaacgcgacttcggtgaccgcccccagcgcagcttcggcgaccgtccccagcgcgat
ttcggcgatcgtccccaacgcagcttcggcgaccgtccgcaacgtgatttcggcgatcgt
ccccagcgcagcttcggcgaccgcccccagcgcgatttcggtgatcgtccccaacgcagc
ttcggcgaccgcccccagggcgatcgtccccaacgcgattttggcgatcgtcctcaacgc
agcttcggcgaccgtccccagcgcagctttggtgaccgcccccagcgcgccgcgccgggc
aagcgctttagcaaaccggctggcgaccgccgcggctga
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