Bordetella avium: BAV0208
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Entry
BAV0208 CDS
T00695
Name
(GenBank) putative radical SAM protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bav
Bordetella avium
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bav03009
]
BAV0208
Enzymes [BR:
bav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BAV0208
Ribosome biogenesis [BR:
bav03009
]
Prokaryotic type
ribosomal protein modification factors
BAV0208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CAJ47813
UniProt:
Q2L0J0
LinkDB
All DBs
Position
complement(214072..>215400)
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AA seq
442 aa
AA seq
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VSKTSRAPRVGFVSLGCPKALVDSERILTQLRTEGYEVTPEYNDADVVVVNTCGFIDSAK
AESLDAIGEALAENGKVIVTGCMGVEESAIRSVHPSVLAVTGPQQYEQVVQAVHSAAPPR
QDHNPYVDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGNLVSRPVGDVLNEAE
RLVKAGVKELLVISQDTSAYGVDLKYRSGFWNGRPVKTRMTELCDALSELGVWTRLHYVY
PYPSVDDIIPLMAEGKVLPYLDIPFQHASPRILKAMKRPAFEDKTLARIHQWRAACPDLT
IRSTFIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANALAGIVPDEVKQER
WERFMEHQQAISAARLQTRIGREIDVLIDEVDEDGAVGRSSADAPEIDGCVYVSSDTPVK
PGDMVRVRVTDADEYDLWADRL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaaaaccagccgtgcgccacgggtgggctttgtctcactcggctgcccgaaggcc
ctggtcgattcggagcgcatcctgacgcagctacgcaccgagggctatgaagtcacgccc
gagtacaacgacgccgatgtggtggtcgtaaacacctgtggcttcatcgacagcgccaag
gccgaatcgctggacgccatcggcgaagccctggcggaaaacggcaaggtcatcgtaacg
ggctgcatgggcgtcgaagagtccgccatccgctcggtgcacccgagcgtgctggccgtg
accggcccgcagcagtatgaacaggtcgtgcaggcggtccacagcgccgcgccgccgcgc
caggatcacaatccctatgtcgatctagtgccgccgcaaggtgtcaaactcacgccgcgc
cactatgcctatctgaaaatttccgagggctgtaatcaccgttgcagcttctgcatcatc
ccgtcgatgcgcggcaacttggtgagccgcccggtgggcgatgtgctcaacgaagccgag
cgcctggtcaaggccggcgtgaaggaactgctggtgatctcccaagacaccagcgcctat
ggcgtcgatctgaagtaccgcagcggtttctggaacggccgcccggtcaagacccgcatg
accgagctgtgcgatgcgctctcggagctgggcgtctggacgcgtttgcattacgtctat
ccttatcccagcgtggacgacatcatccccctgatggccgagggcaaggtgctgccctat
ctggacattcccttccagcacgccagcccgcgcatcctgaaagcgatgaagcgtcccgcc
ttcgaagacaagacgctggcgcgcatccaccaatggcgggccgcctgtccggacctcacg
atccgctccaccttcatcgtcggattccctggcgagacggaagaagatttccaatatctg
ctggactggatgagcgaagcccaactcgaccgcgtgggttgtttccagtattcgccggtg
gagggcgcaccggccaatgcactggccggcatcgtgcccgacgaggtcaagcaggagcgc
tgggaacgcttcatggagcatcagcaggccatttccgctgcccgcctgcaaacccgcatc
ggccgggaaatcgatgtgctgatcgacgaagtcgatgaggacggcgccgtcggccgctcc
agcgccgacgcgcccgagatcgatggttgtgtctatgtgtcgagcgacaccccggtcaag
cctggcgacatggtgcgcgtgcgcgtcacggacgccgatgaatacgatctttgggctgac
cgcctctga
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