Bordetella avium: BAV0533
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Entry
BAV0533 CDS
T00695
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bav
Bordetella avium
Pathway
bav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BAV0533 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bav03400
]
BAV0533 (mutM)
Enzymes [BR:
bav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BAV0533 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BAV0533 (mutM)
DNA repair and recombination proteins [BR:
bav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BAV0533 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
RNHCP
C1_2
Zn_ribbon_6
DUF7573
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
CAJ48138
UniProt:
Q2KYB7
LinkDB
All DBs
Position
complement(554522..555349)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL
LLRFEHGVQIVHLGMSGSLRRVAMDEAPRKHDHVDWVFDHAILRLHDPRRFGAVLWHPNT
DGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVVGVGNIYASECL
FRAGIDPRTPAGKLSRPRCERLAQAVRATLADALASGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLACRVCGTPIRRLVQGQRATYFCPHCQKR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaagtagaaaccacgcgccggggaatcgaccctgtcatcaccggc
cagacactgcgccgccttgtcgtacgggagccacgcatgcgctggcccatccccgccgac
ctgccctctcttctgacagaccgcccggtgctggccaccggccgccgcggcaaatacctg
ttgctgcgctttgagcacggcgtgcagatcgtgcatctgggcatgtcgggttcgctacgc
cgggtagccatggacgaggcgccacgcaagcacgatcacgtcgattgggtctttgatcac
gccatcctgcggctgcacgatccgcgccgctttggcgccgtgctctggcatcccaacacc
gacgggcccgtcgaggcgcatcccctgctgatcggcctgggcattgaaccctttgatccg
cgttttgacggcaaatggctgcacgatcactttcgtgacaagcgggtcgccgtgaaacag
gccctgctggctggccatgccgtggtcggcgtgggcaatatctacgcatcggagtgcctg
ttccgggcgggtatcgacccgcgcacgcctgccggcaagctgtcgcgcccgcgctgcgaa
cggctggcccaggccgtgcgcgctacgctggccgatgccctggcttcgggcggcagcacc
ctgcgcgattacgtcggggcgtcgggcgagccgggcgcttatttcgccatccatgcggcg
gtttacgagcgcgccggactggcttgccgggtgtgcggcaccccgatccggcgcctcgtg
caggggcagcgggctacgtatttctgtccccattgccagaaacggtaa
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integrated database retrieval system
