KEGG   Bordetella avium: BAV0543
Entry
BAV0543           CDS       T00695                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme EcoR124II R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bav  Bordetella avium
Brite
KEGG Orthology (KO) [BR:bav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bav02048]
    BAV0543 (hsdR)
Enzymes [BR:bav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BAV0543 (hsdR)
Prokaryotic defense system [BR:bav02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BAV0543 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 Ndr
Other DBs
NCBI-ProteinID: CAJ48148
UniProt: Q2KY88
LinkDB
Position
complement(564642..567743)
AA seq 1033 aa
MIDYSPIAESKNYIVLDKYTQEWKVSESYQSEGDLEREFIQDLQNQGYEYLPGLNAPEAL
LANVRVQLQVLNNVQFSDGEWSRFVETWLDKPSDGIVEKTRKIHDDYIHDFVFDDGRIQN
IYLLDKKTITRNKVQVIKQFEQTGSHANRYDVTILVNGLPLVQVELKKRGVAIREAFNQV
HRYSKESFNREHSLFKYLQLFVISNGTDSRYFANTTQRNKNSFDFTMNWAKADNTLIKDL
KDFTATFFQKHTLLNVLLHYSVFDVSNTLLVMRPYQIAATERILWKIKSSHQAKNWSNTE
SGGFIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG
SDSTAGLKRNLEKDDNKIVVTTIQKLNNLMKSEADLPIYGKQVVFIFDECHRSQFGEAQK
NLKKKFKKFCQFGFTGTPIFPENALGAETTASVFGRELHSYVITDAIRDEKVLKFKVDYN
DVRPQFKAIETEQDEKKLSAAENKQALLHPDRIREISQYILNNFRQKTHRLHAGNKGFNA
MFAVSSVDAAKLYYECFRELQKASDKPLKVATIFSFAANEEQDAIGDIQDESFDVSAMNS
SAKEFLSAAIADYNVLFKTNFSVDSNGFQNYYRDLAKQVKAKEIDLLIVVGMFLTGFDAP
TLNTLFVDKNLRYHGLMQAYSRTNRIFDATKTFGNIVTFRDLEQATIDAITMFGDKNTKN
VVLEKSYKEYMEGFTDTATGEARRGFMDVVQELEARFPDPAAIEKESDKKAFAKLFGEYL
RVENVLQNYDEFARLKELQSVDQADPAAVEAFKAKHYLSDEDLASLQAITLPPERKVQDY
RSTYNDVRDWLRREKAGAEKEKSTIDWDDVVFEVDLLKSQEINLDYILELIFEHNKKIKS
KSELVDEVRRVIRASLGNRAKESLLVDFINRTDLDQISDKASVIDAFFKFAQAEQQREAQ
ELIDTENLNVEAARRYLITSLKREFASEHGTELNALLPKMSPLNPQFKTKKQTVFQKIAA
FVEKFKGVGGQLI
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgatcgactatagccctatcgctgaatcgaaaaattacatcgttctggataaatacacc
caagaatggaaagtttcggaaagctaccagagtgaaggcgatctggaacgtgaattcatt
caggatttgcagaatcagggttatgaatacctgcccggcctgaatgcgccggaagccttg
ctggccaatgtgcgcgtccagctacaagtgctcaataacgtccagttctcagacggcgaa
tggtcgcgctttgtcgagacctggctggacaagcctagcgatggcatcgtggagaagacc
cgcaagatccacgacgactacatccacgactttgtttttgacgacgggcgcatccagaac
atctacctgctggacaagaaaaccatcacccgaaacaaggtgcaggtgatcaagcagttt
gagcagacgggcagccacgccaaccgctatgacgtaacgattctggtcaatggcctgccg
ctggtacaggtggaactgaagaagcgcggtgtggccatccgcgaagccttcaaccaggta
caccgctacagcaaggagagcttcaacagagagcattccctgttcaagtatttgcaactg
ttcgtgatctccaacggcaccgacagccgctactttgccaacaccacgcagcgcaacaag
aacagcttcgacttcaccatgaactgggcgaaggcggacaacacgctgatcaaggacctg
aaggacttcacggccaccttcttccagaagcacacgctgctcaatgtgctgctgcattac
tcggtgttcgatgtcagcaacacgctgctggtgatgcggccttatcagatcgccgccacg
gaacgcattctgtggaagattaagagcagccatcaggccaaaaactggagcaacacagaa
agcggcggcttcatctggcacaccaccggcagcggcaagaccctgactagtttcaaggcc
gcgcgcctggccaccgagctggacttcatcgacaaggtgttcttcgtggtggaccgcaaa
gatctggactaccagaccatgaaggaataccagcgcttttctccggacagcgtgaatggc
tcggacagcacggcggggctgaagcgcaacctggagaaagacgacaacaagatcgtcgtc
accaccatccagaagctcaacaacctgatgaagagcgaggcggacttacccatttacggt
aagcaggtggtgttcatttttgatgaatgccaccgcagccagtttggcgaagcccagaag
aacctgaagaagaagttcaagaagttctgccagttcggcttcactggcacgcccatcttc
ccggagaacgccttgggtgccgagaccacggcgagcgtgtttggccgtgagctgcactca
tacgtgatcaccgatgcgatccgcgacgagaaggtgttgaagttcaaggtggactacaac
gatgttcgcccgcagttcaaggccatcgagaccgagcaggacgaaaagaagctaagtgca
gccgagaacaagcaggccctgctgcacccggatcgcatccgcgagatctctcagtacatc
ctgaacaacttccggcaaaaaacccaccgcctgcatgcaggcaacaagggcttcaacgcc
atgtttgccgtcagcagtgtggatgccgccaagctgtactacgagtgcttccgggagttg
cagaaggccagcgacaagccgctgaaagtggccaccatcttctcgttcgcagcaaacgag
gagcaggacgcgattggcgacatccaggacgagagctttgatgtctcggccatgaacagc
agcgccaaggagtttctgagcgcggccatcgccgattacaacgtactgttcaagaccaac
ttcagcgtggatagcaacggtttccagaactactaccgagacctggctaaacaggtgaag
gccaaggaaatcgacctgctcatcgtggtgggtatgttcctgactggctttgatgccccc
acgctgaacacgctgtttgtcgacaagaacctgcgctatcacgggctgatgcaggcctac
tcgcgtaccaaccgcatcttcgacgccaccaagacctttggcaacatcgtcaccttccgc
gacttggagcaggccaccatcgacgctatcacgatgttcggtgacaagaacaccaagaac
gtggtgctggagaagagctacaaggagtacatggaaggcttcaccgatacggccaccggt
gaggcgcggcggggcttcatggatgtggtgcaggaactggaagcccgcttccctgacccg
gccgccattgagaaagagtcggacaagaaggccttcgccaagctgttcggcgagtacctg
cgcgtcgagaacgtgctacagaactatgacgaatttgccaggttgaaggagttgcaaagc
gtcgatcaggccgaccctgccgcagttgaggcattcaaggccaagcactacctgagtgac
gaagatctggcctcactgcaagccatcacgctcccgcccgagcggaaggttcaggattat
cgctcgacctataacgacgtgcgcgactggctacgccgagagaaggcgggggccgagaaa
gagaagtccaccattgactgggacgatgtggtcttcgaggtggacctattgaagtcacag
gaaatcaacctggactacatcctggaactgatcttcgagcacaacaagaagatcaagagt
aagtcggaactggtggatgaggtgcgccgagtgattcgtgcaagcctgggtaatcgcgcc
aaagagagcttgctggtggactttatcaaccggaccgacctggaccagatcagtgacaag
gctagcgtgatcgacgccttcttcaagtttgcgcaagcggagcagcaacgcgaagcgcag
gaattgatcgacaccgagaacctcaacgtagaagctgccaggcgatacctcatcacctca
ctcaagcgggagtttgccagcgagcacggcaccgaactcaacgcgctgctgcccaagatg
agtcccttgaacccacagttcaagaccaagaagcagaccgtctttcagaagatcgcggca
ttcgttgagaagttcaaaggggtgggcgggcaactgatataa

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