Bordetella avium: BAV0636
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Entry
BAV0636 CDS
T00695
Symbol
fecI
Name
(GenBank) probable RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bav
Bordetella avium
Pathway
bav02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAV0636 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bav03021
]
BAV0636 (fecI)
Transcription machinery [BR:
bav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAV0636 (fecI)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_IclR
DUF6362
Sigma70_r4
HTH_29
DUF8658
Motif
Other DBs
NCBI-ProteinID:
CAJ48241
UniProt:
Q2KXL4
LinkDB
All DBs
Position
complement(662032..662727)
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AA seq
231 aa
AA seq
DB search
MGQAAMLLPSHNRRIHRQASHPLAPRRRANPRLAQRFPQAIGVLLAPNLLSTINNNYHLQ
EYGMTSSKQAHVETLYADHHGWLQSWMRRQLGNSFEAADLAHDVFLRLLRRPAAIETREP
RAYLSAIARGLLIDHWRRRELERAWLEALAHTPEALAPSPETRMLVLEALIKIDQMLDTL
KPKVRQAFLWAQLEGMRCPQIAQRLGVSLATAERYVAAGLRHCYACRFGEP
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggggcaggcggcaatgctgctgcccagtcataaccgccggatacaccggcaggccagc
caccctctcgccccccgccgccgggcgaaccctcgtcttgcccagcgttttccccaggct
atcggcgtcttgcttgcgccaaatctgttatctacaataaataataattatcatttgcaa
gaatatggaatgacctcctcaaagcaagcccacgtcgagacgctgtacgccgaccatcac
ggatggttgcaaagctggatgcgccggcaactggggaactccttcgaggcggccgatctt
gcgcacgatgtattcctgcggctgctgcgccgccctgcggccatcgaaacccgcgaaccc
cgcgcctacctgagcgccattgcgcgcggccttctgatcgaccactggcgccgccgagaa
ctcgaacgcgcctggctggaggcgctggcgcatacccccgaagccctggcgccctcgccc
gaaacccggatgctggtgctcgaagcgctcatcaaaatcgatcaaatgctcgataccctc
aagcccaaggtgcgccaggcgtttctatgggcgcagctcgagggcatgcgctgcccgcag
atagcgcagcgtctgggggtctctctggcgaccgccgagcgctatgtggcggcgggcctg
cgccactgctatgcctgccgcttcggtgagccgtga
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