Bordetella avium: BAV1417
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Entry
BAV1417 CDS
T00695
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bav
Bordetella avium
Pathway
bav03420
Nucleotide excision repair
bav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAV1417 (uvrD)
03430 Mismatch repair
BAV1417 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bav03400
]
BAV1417 (uvrD)
Enzymes [BR:
bav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAV1417 (uvrD)
DNA repair and recombination proteins [BR:
bav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAV1417 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BAV1417 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAJ49026
UniProt:
Q2L2J9
LinkDB
All DBs
Position
1487892..1490144
Genome browser
AA seq
750 aa
AA seq
DB search
MMLDKLNPQQLAAVTLEPLHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGILAVTFTN
KAAREMLMRMAATMPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQAFQILDTADQLAAIK
RLLKAQGIDDEKYPPRDVQRFINGSKEDGLRPAEVEAWDAHRRKLVEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYAQGRVIRLEQNYRSFGHILDAANALIGHNSGRLG
KNLWTDQGEGELIRIIEQPSDGMEAQWVVDEIRSLINEGRARSEIAVLYRSNAQSRVLEH
ALFSAGVAYKVYGGLRFFERQEIKHALAYLRLIANPDDDTSLMRVVNFPTRGIGARTLEL
LADAASSSQTSLFGAVARVPGKGGANLAQFAQLIGRLAAETRDLPLPEMVGHIIEESGLK
AHYQAEREGAERLENLNELVTAAAVFAAEENFDSLPAGVALQTDAAEGEPPVPSMSPLAA
FLSHAALEAGDNQAQAGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHENSILEPAGLE
EERRLMYVAITRARERLYLTLAQSRMLHGQTRYAMRSRFLEEIPESHLKWLSPRASQGAG
GGMAWSERGDAYGRRQTGTITPRAPRSLTTGVTVGDAQYRVGQGVRHARFGEGTIIGLSG
TGQDAQAQIQFRDAGTKTLALGIAKLDIIA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcgataagctcaacccgcaacaactcgctgccgttactctcgaaccgcttcac
gccctggtccttgccggggcgggtagcggtaagacccgggttctcacgacccgcatggcc
tggctgattcaaaccggtcaggccagtccttttggcattctggcagttacgttcacgaac
aaggccgcccgcgagatgttgatgcgcatggcagccaccatgccgatcgatacgcgcggc
ctgtggatcggtacctttcacggcctgtgcaatcgcatgttgcgcgcgcatcaccgcgat
gcgggcttgccgcaggccttccagattctcgacacggccgatcagctcgccgccatcaag
cgtttactcaaagcgcagggcatcgacgacgagaagtatccgccgcgtgacgtgcagcgt
ttcatcaacggcagcaaggaagatggcctgcgcccggccgaggtcgaggcctgggatgcg
caccgccgcaaactcgtcgagatttatcaactctatgaagcgcaatgtcagcgtgaaggc
gtggtcgatttcgccgagctcttgttgcgcgcctatgagttgctgagccgcaacgcgccc
gtgcgcgagcactatcagcggcgcttccgacatatccttgtcgatgaattccaggatacc
aatacgctgcagtacaaatggctgcgtctgttggctggcggcggggcggcgatcttcgcc
gtgggcgatgacgatcaatccatttacgcctttcggggcgccaatgtcggcaatatggcc
gacttcgagcgcgactacgcccaggggcgggtgattcgcctggagcagaactatcgctct
ttcgggcacattctggatgcagctaatgcgctgatcggccataacagcggccggctgggt
aaaaacctctggaccgaccagggggaaggcgagctgattcgtatcatcgagcagccctcc
gacggcatggaggcgcagtgggtggtcgatgaaatccgttccttgatcaacgaaggccgc
gcgcgcagcgaaatcgccgtgctctatcgcagcaacgcccagtctcgggtgctcgagcat
gcgctgttttctgccggcgtggcgtacaaggtgtatggcggcctgcgctttttcgagagg
caggagatcaagcatgcgctggcctatctgcgcctgatcgccaatcccgatgacgacacc
tcgctgatgcgggtggtgaattttccgacacgcggcatcggcgcccgcacgctcgaactc
ttggcggacgccgcttccagcagccagaccagcctctttggcgcggtggcacgggtgccg
ggtaagggcggggccaatctcgcgcagttcgcgcagcttatcggcaggcttgccgccgag
acacgtgatttgccgctgcccgagatggttgggcacatcatcgaggaaagcggcctgaag
gcgcattaccaggccgagcgcgaaggcgccgagcgcctcgaaaacctgaatgaactcgtg
acggcggcggcggtgttcgcggccgaagagaacttcgacagcttgcctgcgggcgtggcg
ctgcaaaccgacgctgccgaaggcgaaccgcctgtgcccagcatgtcgcctcttgcggcg
tttctgtcgcacgcggcgcttgaggcgggtgacaaccaggctcaggcaggccaggacgcc
gtgcagcttatgacggtgcatgctgccaagggcctggagtttgacgccgtctttatcacc
ggtctggaagagggcttgttcccgcacgagaacagcattcttgagccggcaggcctcgaa
gaagagcggcgcttgatgtatgtcgccatcacgcgggctcgcgagcggctctacctgacg
ctggcgcaaagccgtatgctgcatggtcagactcgttatgccatgcgttcgcgttttctc
gaagaaatccccgagtctcatctcaaatggcttagcccgcgggcatcgcaaggcgcgggt
gggggcatggcttggagcgagcgcggcgacgcctatggccgtcgccagacaggaaccatc
acgccgcgtgcgccacgctcgctcacgacaggcgtgaccgtcggtgacgcccaataccgg
gtgggtcagggtgtgcgtcatgcgcgctttggcgagggcacgatcatcggtttgagcggc
acgggccaggatgctcaggcccagatacagtttcgcgacgctggcactaagacactggcg
ctgggtatcgccaagctggacatcatcgcttga
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integrated database retrieval system
