Bordetella avium: BAV1505
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Entry
BAV1505 CDS
T00695
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bav
Bordetella avium
Pathway
bav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAV1505 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bav03400
]
BAV1505 (uvrB)
DNA repair and recombination proteins [BR:
bav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAV1505 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAV1505 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAJ49118
UniProt:
Q2L244
LinkDB
All DBs
Position
1559074..1561104
Genome browser
AA seq
676 aa
AA seq
DB search
MTDPGYVEFPGSPFQLFQPYAPAGDQPAAIEGLVQGVADGLMYQTLLGVTGSGKTFTMAN
VIARLGRPALVLAPNKTLAAQLYAEMRDFFPKNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSVNEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLILRAGDRISRRE
VLARLVAMQYTRNDADFTRGAFRVRGETIDIFPAESPELALRLTLFDDEVETLELFDPLT
GKVRQKLPRFTVYPGSHYVTPRETVLRAIETIREELRERLSTFTNEGKLLEAQRIEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTVGQLGGMY
RGDRARKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPADYERQHADNVVEQV
VRPTGLVDPEVEVRPAHTQVDDLLGEIRHRVARQERVLVTTLTKRMSEDLTDFLAEHGVR
VRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLHGHAILYADRITDSMRRAMDETSRRRSKQLQHNADHGITARGVNKA
VRELIDGVMAPATTHDALEDAVPLAALTDEKAMAREIKRLEKLMMDHARNLEFEQAAAAR
DALTALKNRLLLDGVR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccctggatacgtcgaatttcccggcagtccttttcaactctttcagccctat
gcgccggctggcgatcagcccgccgccattgagggactcgtccagggggtggctgatgga
ctgatgtaccagaccttgcttggcgtcacgggctcgggtaagacatttaccatggccaac
gtgatcgcccggctagggcgtccggccttggtgctcgcgcccaacaagaccctggcggcg
cagctttacgccgagatgcgcgatttctttcccaagaatgcggtcgagtatttcgtctct
tactacgattactaccagcctgaggcctatgtgcccacgcgcgacctgttcattgagaag
gattcctcagtcaatgaacatatcgagcagatgcgtttgtcggccaccaagagcctgctg
gaacggcgcgacaccatcatcgtgggcacggtgtcctgcatctacggtatcggcaacccg
ggcgactaccatgcaatggtgctgatcctgcgcgcaggagatcgtatttcccgccgtgag
gtgctggcccggctggtcgccatgcagtacacgcgcaacgatgctgatttcacgcgcggc
gcgttccgcgttcgcggtgaaaccatcgacatttttccggcggaaagccccgaactcgcc
ttgcgcctgacgctattcgatgatgaggttgaaacgctggagctgtttgaccctttgacc
ggcaaggtgcgtcaaaagctgccgcgttttacggtctatccggggtcgcattacgtgacg
ccgcgagagacggtgctgcgcgccatcgagaccatcagggaagagttgcgcgaacggctg
tccacgttcacgaatgagggcaagctgctcgaagctcagcggattgagcagcgcactcgt
ttcgatcttgaaatgttgcaagagctgggtttctgcaaaggcattgaaaactattctcgt
catttatccggcgcggcgccgggtgagccgccgccgacgctgattgattatttgcctgcc
gatgccctgatgttcatcgacgaaagtcacgtcacggtggggcagctgggtggcatgtat
cggggtgaccgggcgcgcaaggagacactggtgcaatatggtttccgcctgccttcggcc
ctggataaccggcctttaagactagaggagttcgaagcccgcatgcgccagtgcgttttt
gtgtccgccaccccggcggattacgaacgccagcatgccgacaacgtcgtcgagcaggtg
gtgcggccgacaggcctggttgatcctgaggttgaggtgcgcccggcccatactcaggtg
gatgatctgctgggtgaaatccgccatcgcgtggcgcggcaagagcgtgtgctggtcacc
acgctgaccaagcgcatgtccgaggacctgactgacttcctagccgagcacggggtgcgg
gtgcgatatttgcactcggatatcgacacggttgagcgggtggaaattatccgggacctg
cgtctgggggtctttgatgtgctggtgggcatcaatctgttgcgcgaaggcctcgatatt
ccagaggtgtcgttggtggccattctcgatgcggacaaggagggttttctgcgttctgag
cgcagcctgattcagaccataggccgcgccgcccgcaatctgcatggccatgccattttg
tacgctgaccggatcactgactcgatgcgccgtgccatggatgagaccagccggcggcgc
agcaagcagttgcagcacaacgcagaccacggcattacggcgcgcggggtgaataaggcg
gtgcgagagctgatcgatggcgtcatggcgcccgcgaccacccatgacgcgctcgaagat
gccgtgccgctcgctgccctgacggatgaaaaagcgatggcgcgcgagatcaagcgtctt
gaaaagctgatgatggatcatgcccgcaacctggagtttgagcaggccgctgcggctcgg
gatgccttgaccgcgctcaaaaatcggctgcttctggacggagtcaggtga
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integrated database retrieval system
