Bordetella avium: BAV1830
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Entry
BAV1830 CDS
T00695
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bav
Bordetella avium
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bav03400
]
BAV1830 (phrB)
Enzymes [BR:
bav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BAV1830 (phrB)
DNA repair and recombination proteins [BR:
bav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BAV1830 (phrB)
Prokaryotic type
BAV1830 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAJ49439
UniProt:
Q2L0S7
LinkDB
All DBs
Position
1921150..1922607
Genome browser
AA seq
485 aa
AA seq
DB search
MTPHPPWLLPLMNTLVWLRSDLRLHDNPALAAAAAQGHTHALFFAAPGQWQSHGDAAIKI
DFWRRNLVALHQALAELGFDLSVITLQDWSEAPQALAQFCRQHRIESVHVNAEWGINERR
RDGACAQRLQAEGIAFEVHQGGTLLPPGSVRNGKGDPYRVFTPYARACREKLRVAPPAPV
RAPKAQGPAFAPAEFDWPPSAEFPAQAATLWPAGETAAHERLRAFLDDGLMRYHERRDLP
AVPGTSALSPYLACGVLSPAQCLRAALRANQGEIDSGQTGPRVWITEILWREFYQHLLAA
YPALSMHQPMRPETAYLAWRDAPQDAAAWRAGRTGIPIVDAAQRQLLATGWMHNRLRMIS
AMFLSKNLLIDWRLGEAWFMAHLIDGELAANNGGWQWSASTGADAVPYFRVFNPITQSQK
FDPDGVFLRRWLPELANLDSKSIHEPSDAQRRASAYPKAIVDLKSSRLRAIEAFSRLPPA
AALGD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccaccccccttggctccttccgctgatgaacacgctggtctggctgcgcagc
gatctgcgcctgcatgacaaccccgccctggccgccgccgccgcgcaaggccacacccac
gcgctttttttcgccgcgccgggccaatggcaatcgcatggcgatgccgcaattaaaatc
gatttctggcgccgcaatctcgtggccctacatcaggcgctggccgagctgggcttcgac
ttgtcggtaatcacgctgcaagactggtcagaagcgcctcaagccctggcccaattttgc
aggcagcaccggatcgaaagcgtacatgtcaacgccgagtggggcatcaatgagcgccgc
cgtgatggggcctgcgcgcagcggctgcaagccgagggcattgcgttcgaagtgcatcag
ggaggcaccctgttgccccctggcagcgtgcgcaacggcaagggagacccctaccgggtg
tttaccccttacgcgcgggcttgccgcgaaaaactgcgcgtggccccgcccgcgcccgtg
cgcgctcccaaagcccaggggcctgcctttgcaccagccgagttcgattggccccccagt
gcggaatttcccgctcaggccgccacactctggccagcaggagaaacggctgcgcatgaa
cgcctgcgtgcctttctggacgacggtctgatgcgttatcacgaacgccgcgacctgccc
gccgtgcccggaaccagcgccctttccccctatctggcctgcggcgtcctgtcccctgcg
caatgcctgcgtgccgcgctgcgggccaaccagggagaaatagatagcggacagaccggg
cctcgcgtatggataaccgagattctctggcgggagttctatcagcatctgctggcagcc
tatccggctctgtccatgcatcagcccatgcgtcctgagaccgcctacctcgcctggcgc
gacgcgccgcaggacgcagcggcctggcgggcaggacgcaccggcattcccatcgttgac
gccgctcaacgtcaattgctggcgaccggctggatgcacaatcggctgcgcatgatcagc
gccatgtttctttccaagaatctgctgatcgactggcgtttgggcgaagcctggttcatg
gctcatctgatcgacggcgaactggcggccaacaatggcggctggcaatggagcgcctcc
acgggcgccgacgccgttccctatttccgagtattcaatccgatcacgcaatcccagaaa
tttgaccctgacggggtttttcttcgccgctggctgcccgaactcgccaatctggacagc
aaatccattcatgaaccatcggacgcgcagcgacgcgcgagcgcttacccaaaagcgatc
gtcgatctgaaaagcagccgcctgcgggctatagaggccttctcgcgcctgccccctgcc
gccgcgctgggcgactaa
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