Bordetella avium: BAV1976
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Entry
BAV1976 CDS
T00695
Symbol
rumA
Name
(GenBank) 23s rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bav
Bordetella avium
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bav03009
]
BAV1976 (rumA)
Enzymes [BR:
bav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BAV1976 (rumA)
Ribosome biogenesis [BR:
bav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BAV1976 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_ANTKMT
TRAM
Methyltransf_25
Methyltransf_31
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_32
PCMT
MTS
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CAJ49585
UniProt:
Q2L016
LinkDB
All DBs
Position
complement(2119237..2120667)
Genome browser
AA seq
476 aa
AA seq
DB search
MVDEVLKIESLDLEARGIARRDGKVVFVEGALPGERVYAATVRRKPSYEIARVETVLTPS
SQRVEPRCPHFGVCGGCAMQHLEPTSQVAIKQRALEDTFWHVGKIRPQRVLPPLHGPTWG
YRYRARLSVRVVPKKGGVLVGFHERKSSYVADMRECHVLPRHVSDLLLPLRAMIAALSRP
ERIPQIEVALGEGVTALVLRHIEPLNDHDITVLRDFAARHNVQWWLQSKGPDTVHPLDPA
HGDTLAYTMPEFGLRMPYRPTDFTQVNHAINRSMVSRALKLLEVQPTDRVADLFCGLGNF
TLPLATQGREAVGVEGSKALTDRALEAAARHGLEGRTRFATLNLFEVDVSWLRGLGYFDR
MLIDPPREGAHAVAQALSQLTPAERPRRIVYVSCNPATLARDAAIMVHEGGYVLKAAGVI
NMFPHTGHVESIAVFESLADDEVLHVQQQARLKAELAAQEAAEATVQAGAASEQPA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgaagttctgaaaatcgaatccctggacctggaagccaggggtattgcccgc
cgcgatggcaaagtcgtgttcgtcgagggcgccttgcccggggagcgggtgtacgccgcc
acggtgcgccgcaaaccctcttatgagatcgcgcgcgtggagacggtgctcacgccctcg
tcacaacgcgttgagccgcgctgcccccacttcggcgtatgtggcggctgtgccatgcag
catctggagcccacctcgcaggtggccatcaagcagcgtgcgctcgaagacactttctgg
catgtgggcaagatccggcctcagcgcgtcttgccgccgctgcacggcccgacatggggc
tatcgctatcgcgctcgcctgtcggtgcgtgtggtgcccaagaagggtggcgtgctggtg
ggctttcacgaacgcaaaagcagctatgtggccgacatgcgtgaatgccatgtgctgccg
cgccatgtgagcgatctgcttttgcccttgcgcgccatgatcgcagccctgtcgcgtccc
gagcgtataccgcagatcgaagtggcgctaggcgagggggtgaccgccttggtgctgcgc
catatcgagccgctcaacgatcatgacatcacggttctgcgcgattttgcggcccgccat
aacgtgcaatggtggttgcagtccaaggggcctgatacggtgcatccgctcgatcccgcc
catggcgatactctggcttacaccatgcccgagttcggtttacgcatgccgtatcggccg
accgacttcacccaggtgaatcacgcgatcaatcgttcgatggtgtcgcgtgcgctgaag
ttattggaagttcagcccactgaccgcgtggcggatctgttctgcggcctaggcaacttc
acgctgccgctggccacgcagggtcgcgaagccgtgggtgtcgagggcagcaaagcgctg
actgatcgcgccctggaagcggcggctcgccatggcctcgaaggccgcacccgtttcgca
acgctgaatctgtttgaggtcgatgtatcctggctgcgcggcctgggctatttcgaccgc
atgctgatcgatccgccgcgcgagggggcgcacgccgtggcgcaggcgctgtcccagctc
acgcccgctgagcgccctcgccgcattgtgtacgtgtcgtgtaatccggcaaccctcgct
cgcgatgccgctatcatggtccatgaaggcggctacgtgttaaaggcggccggcgtcatc
aatatgttcccgcataccggccacgtcgagtctatcgccgtgttcgagtcgctagccgat
gacgaagtgctgcatgtgcagcagcaggctcgcctcaaggcagagctggctgcgcaggag
gcggccgaagcaacggtccaggccggcgctgccagcgaacagcctgcttaa
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integrated database retrieval system
