Bordetella avium: BAV2508
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Entry
BAV2508 CDS
T00695
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bav
Bordetella avium
Pathway
bav03030
DNA replication
bav03430
Mismatch repair
bav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAV2508
03430 Mismatch repair
BAV2508
03440 Homologous recombination
BAV2508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bav03032
]
BAV2508
03400 DNA repair and recombination proteins [BR:
bav03400
]
BAV2508
Enzymes [BR:
bav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAV2508
DNA replication proteins [BR:
bav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAV2508
DNA repair and recombination proteins [BR:
bav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAV2508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAJ50118
UniProt:
Q2KXB5
LinkDB
All DBs
Position
complement(2709884..2710465)
Genome browser
AA seq
193 aa
AA seq
DB search
MSYFSAAHRQSRQSDTTSRALTALGSAFVVADLETTGLSAHACEILEFAAVRVDTEGQIA
SEYSQLVRINGRVPSFIARLTGISQQEVIRDGKPIDEAFRAFCDFVGTAPVFFHNASFDT
RFLRATASRCGQAFDNDTHCTLLLARRAWPELRSHKLGMLAEHLGAATPTHRALADVRAT
VAVALAARARLGH
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatatttctccgcagctcatcgtcaatcccgccagagtgataccacttcccgcgcc
ttgaccgccttgggcagcgcctttgtcgtcgctgacctggaaaccaccggtttatcggcg
cacgcctgtgagatcctcgagttcgctgcagtgcgggtcgacaccgaggggcagattgcc
agcgagtacagccagcttgtgcgcatcaacggccgggtgcctagctttattgcgcggctc
accggcatttctcagcaggaggtcatccgtgatggcaagcctattgatgaggctttccgg
gccttttgcgattttgtcgggacggcgcccgtgtttttccacaatgcgtcctttgacacc
cgttttctgcgcgccacggcctcgcgctgtgggcaagccttcgacaacgacacgcattgc
acactgttgctcgcccgccgcgcctggccagagttgcgctcgcacaaactcggcatgctt
gccgaacacctgggggctgccacgccgactcaccgggccctggccgacgtgcgtgcgacg
gtcgcggtagccctggccgcccgggcgcgtctgggtcattga
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