Bordetella avium: BAV2667
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Entry
BAV2667 CDS
T00695
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bav
Bordetella avium
Pathway
bav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAV2667 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bav03019
]
BAV2667 (pnp)
03016 Transfer RNA biogenesis [BR:
bav03016
]
BAV2667 (pnp)
Enzymes [BR:
bav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BAV2667 (pnp)
Messenger RNA biogenesis [BR:
bav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BAV2667 (pnp)
Transfer RNA biogenesis [BR:
bav03016
]
Prokaryotic type
tRNA degradation factors
BAV2667 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
KH_KhpA-B
TMP-TENI
KH-I_KHDC4-BBP
KH_SLS1_2
S1_RRP5
DUF5813
Motif
Other DBs
NCBI-ProteinID:
CAJ50278
UniProt:
Q2KWI6
LinkDB
All DBs
Position
complement(2884562..2886718)
Genome browser
AA seq
718 aa
AA seq
DB search
MFNKVTKTFQYGQHTVVLETGEIARQASGAVLVSVEDTVVLATVVAAKKAKPGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEGFYNEVQVVIHTLSV
NPEIDPDIPAMIGASAALAISGIPFNGPIGAARVAYVEGQYLLNPTASQLKSSKMDLVVA
GTENAVLMVESEAQQLSEEIMLGGVVFGHEQMQAAINAIHDLVRDAGKPEWTWSPAAKNE
ALIAAVTAAAQEGLSAAYQIREKQARTTKLREVYAEVSAKLAEQAAAAGQDAPDGVTVDN
ILFDLEARLVRSQILNGEPRIDGRDTRTVRPISVRLGVLPRAHGSALFTRGETQALVVAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLVPVL
PKPEDFQYTIRIVSEITESNGSSSMASVCGGSLAMMDAGVPITDHVAGVAMGLILENGKF
AVLTDILGDEDHLGDMDFKVAGTENGITALQMDIKIQGITKEIMQVALAQAREGRLHILG
KMRESLDGSRTELSAFAPRMLTIKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VIASVDEGQAKEAQRRIVELTADVEVGQVYDGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NYRIANINDVLKVGQQVRVKVIEADEKGRLRLSVKAIGGIEQQQAAADVPAQAETPAE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaagtcactaagactttccagtacggccagcatacggtcgtgttggaaacc
ggcgagatcgctcgccaggcctccggcgctgtgcttgtgtccgttgaggacaccgtcgtg
ttggccacggttgtcgcggccaagaaggccaaacccggtcaggattttttccccctgacg
gttgattacatcgaaaaaacctatgcggcaggccgcatccccggtggtttcttcaagcgc
gagggtaagccctccgagaaggaaacgctgacttcccgcctgatcgaccgtcctctgcgt
ccgctcttccccgaaggcttctacaacgaagtccaggtggtgatccacacgctgtcggtc
aacccggaaatcgatcccgacatccccgccatgatcggcgcctcggccgcgctggccatc
tcgggcattccgttcaacggccccattggtgctgcccgcgtggcttatgtcgagggtcaa
tacctgttgaacccgacggcttcgcagctcaagtcctcgaagatggatttggtggttgcc
ggcacggaaaacgccgttctgatggtggaatccgaagctcagcaactgtcggaagagatc
atgctgggtggcgtggtgttcggccacgaacaaatgcaggccgccatcaacgccatccat
gatctggtgcgcgacgctggcaagcccgagtggacctggtcgcccgcagccaagaacgaa
gccctgatcgccgctgtgacggctgccgctcaggaaggcttgagcgccgcctatcagatc
cgtgaaaagcaggcccgcaccaccaagctgcgtgaggtctacgctgaggtgtcggccaag
ctggccgagcaggccgctgccgccggtcaggatgcgcccgatggcgtgaccgttgacaac
atcctcttcgatctggaagcccgcctcgtgcgcagccagatcctgaatggcgagccgcgt
atcgacggtcgcgacacccgcaccgtgcgtccgatcagcgtccgtctgggcgtgctgccg
cgcgctcacggcagcgccttgttcacccgtggtgaaacgcaggcgctggtggtggcgacg
ctgggcaccaagcaagatgagcagatcatcgacgcgctgatgggcgagtaccgcgaccgc
ttcatgctgcactacaacatgcctcccttcgccaccggcgaaacgggtcgtatcggtgtg
cccaagcgccgcgaaatcggccacggccgtctggccaagcgttcgctggtgccggtgctg
cccaagcccgaagacttccagtacaccattcgcatcgtgtcggaaatcaccgagtccaac
ggttcttcctcgatggcttcggtctgcggcggttcgctggccatgatggatgcgggtgtg
ccgatcacggatcacgtcgctggcgtcgccatgggcttgatcctcgagaacggcaagttc
gccgtgctgaccgatattctgggtgacgaagatcacctgggcgacatggacttcaaggtt
gcggggaccgaaaacggtattaccgctctccagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggttgcgctggcccaggcccgcgaaggccgtctgcacatcctcggc
aagatgcgtgagtcgctcgacggttcgcgcaccgaactgtcggcgtttgccccgcgtatg
ctgaccatcaagatcaatcccgaaaagatccgtgacgtgatcggcaagggcggcgccacc
attcgcgccctgaccgaagaaaccggcacccagatcgacatctccgatgacggcacgatc
gtgatcgccagcgtggatgagggtcaggccaaggaagcgcaacgccgtatcgtcgaactg
accgctgatgtcgaagtcggccaggtctatgacggctccgtgctgcgcctcttggacttt
ggcgccatcgttcaggtgctgccgggccgtgatggtctgttgcacatttcggagatcgcc
aactaccgcatcgccaacatcaatgatgtgttgaaggtcggtcaacaagtccgtgtcaag
gtcatcgaggccgacgaaaaaggccgcctgcgcctgtccgtcaaggctatcggtggcatt
gagcagcagcaagctgccgccgatgtgccggctcaagccgaaacgccggccgagtaa
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