Bordetella avium: BAV2961
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Entry
BAV2961 CDS
T00695
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bav
Bordetella avium
Pathway
bav00260
Glycine, serine and threonine metabolism
bav00460
Cyanoamino acid metabolism
bav00630
Glyoxylate and dicarboxylate metabolism
bav00670
One carbon pool by folate
bav00680
Methane metabolism
bav01100
Metabolic pathways
bav01110
Biosynthesis of secondary metabolites
bav01120
Microbial metabolism in diverse environments
bav01200
Carbon metabolism
bav01230
Biosynthesis of amino acids
bav01240
Biosynthesis of cofactors
bav04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BAV2961 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BAV2961 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BAV2961 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BAV2961 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BAV2961 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BAV2961 (glyA)
Enzymes [BR:
bav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BAV2961 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CAJ50571
UniProt:
Q2KV15
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All DBs
Position
complement(3217707..3218957)
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AA seq
416 aa
AA seq
DB search
MFDRKLTLDKVDPDLWAAIQKEDERQEQHIELIASENYASPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRLKELFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFLSYGLDENEVLNYAQVEALAREHKPKLIVAGASAYALH
IDFERMARIARENGALFMVDIAHYAGLVAGGQYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAQHEKAVNSAIFPGIQGGPLEHVIAAKAVAFKEALSPEFKDYASQVVKNAKVLAETLV
KRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGKAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFKEAEAELTGNLIADVLENPHDEANIAAVRAKVNELTSRLPVYSAK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaccgcaagctcaccctcgacaaggtggaccccgacctttgggccgccatccag
aaagaagacgaacgtcaagagcagcatattgagctgatcgcctccgaaaactacgccagc
ccggccgtcatgcaggcccagggcacgcagttgacgaacaagtacgccgaaggctatccc
ggcaagcgttattacggcggttgcgaatacgttgatatcgtcgagcagcttgcgatcgat
cgcctgaaagaactgtttggcgctgaagccgccaacgtgcagcccaactcgggctcgcag
gccaaccagggcgtctacatggccgtgctcaagccgggtgacaccgtgctgggcatgagc
ctggcagagggcggccacctgacgcatggcgcttccgtcaatgcttcgggcaagctgtac
aacttcctgtcttatggtctggacgaaaacgaagtcctgaactatgcccaggtcgaggcg
ctggcccgtgagcacaagcccaagctgatcgtggcgggggcttccgcctatgcgctgcac
atcgactttgaacgtatggcccgcatcgcccgcgaaaatggcgcgctgttcatggtcgat
atcgctcactacgcgggtctggtcgctggcggccaataccccaacccggtgccgcatgcc
gatttcgttacctcgaccacgcacaagtcgctgcgcggcccgcgtggcggcgtcatcatg
atgaaggcccagcacgagaaggccgtcaattcggccatcttcccgggcattcagggcggt
cctttggagcatgtcattgcggccaaggccgtggctttcaaggaagccctgtcgcctgag
ttcaaggactacgccagccaggtcgtcaagaacgccaaggtcttggccgaaaccctggtc
aagcgtggtctgcgtattgtgtcgggtcgcaccgaaagccacgtcatgctggttgatctg
cgtgccaagggtattaccggcaaggaagccgaagccgtgttgggcaaggcccatatcacg
gtcaacaagaacgccatcccgaacgatccggaaaagcccttcgtcaccagcggcatccgt
ctgggcacgccggccatgaccacgcgcggcttcaaggaagccgaagccgaactgaccggc
aacctgatcgccgacgttctcgaaaacccgcatgacgaggcgaatatcgccgctgtccgc
gccaaggtgaacgagctgacgtcgcgtctgccggtttacagcgccaagtaa
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