Bordetella avium: BAV3285
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Entry
BAV3285 CDS
T00695
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
bav
Bordetella avium
Brite
KEGG Orthology (KO) [BR:
bav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bav03021
]
BAV3285 (rpoH)
Transcription machinery [BR:
bav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAV3285 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
GatC
Motif
Other DBs
NCBI-ProteinID:
CAJ50895
UniProt:
Q2KTW5
LinkDB
All DBs
Position
complement(3571171..3572094)
Genome browser
AA seq
307 aa
AA seq
DB search
MPVSPSFHGGRKMNSASPSLTPSGNALALVVANPGALGTIDAYITTVNRLPVLTAEQEST
LARRLRDSDDLESARELVLSHLRLVVSVARQYLGYGLPHADLIQEGNVGLMKAVKRFDPE
RGVRLVSFAVHWIKAEIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGHTLDTEQVDH
IARELNVRREDVSEMEVRLSGRDLSLENQDDDDDGYAPIAYLSDECREEPTRVLERKARD
DLQGKGLSDAITALDPRSRRIVEARWLQDEGGATLHELAAEFGVSAERIRQIEAAALKKM
RGALAAA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttccccctcgtttcatggaggccgcaaaatgaattctgccagtccctcgttg
accccgtcgggtaacgccctggccttggtggttgccaatccgggtgcgttgggcacgatc
gatgcctatatcacgacggtaaaccgtctgcctgtcctgacggccgagcaggaatccacg
ctggctcgccgtctgcgcgatagcgatgacctcgagtccgctcgcgagctggtgctgtcg
cacctgcgcctggtggtgtcggtcgcccgtcagtacctgggctacggtctgcctcatgcc
gatctgattcaggaaggcaatgtcggcctcatgaaggccgtcaagcgattcgatcccgag
cgcggtgtgcgcctggtgtcgtttgccgttcactggatcaaagctgaaatccacgaatac
atcatccgcaactggcgtctggtcaaggtggcgaccaccaaggcgcagcgcaagctgttc
ttcaatctgcgcagcatgcggcccgatggccatacgctggacaccgagcaggttgaccac
attgctcgcgaactcaatgttcgccgcgaggatgtcagcgagatggaagtccgcctgtct
ggccgggacctttcgcttgaaaaccaggacgatgacgatgatggctacgcgcccatcgcc
tatctgtccgacgaatgccgagaagagccgacccgcgtgctggaacgcaaagcgcgtgac
gatctgcaaggcaagggtctgtccgatgccatcacggcgctggacccgcgttcgcgtcgt
atcgtcgaggcccgctggttgcaggatgagggcggtgccaccctgcacgaacttgccgca
gagttcggcgtgtctgccgagcgcattcgccagatcgaggctgccgcattgaagaaaatg
cgtggcgccttggcagcggcctga
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