Bacteriovorax sp. As-1: ACN20O_11305
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Entry
ACN20O_11305 CDS
T12062
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bavx Bacteriovorax sp. As-1
Pathway
bavx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bavx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN20O_11305 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bavx03021
]
ACN20O_11305 (rho)
03019 Messenger RNA biogenesis [BR:
bavx03019
]
ACN20O_11305 (rho)
Transcription machinery [BR:
bavx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACN20O_11305 (rho)
Messenger RNA biogenesis [BR:
bavx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACN20O_11305 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
NACHT
ATPase_2
Spore_III_AA
Fungal_virus_P2_C
HeH
Motif
Other DBs
NCBI-ProteinID:
YFJ63496
LinkDB
All DBs
Position
2249052..2250299
Genome browser
AA seq
415 aa
AA seq
DB search
MHLNDLREKEIAELTTMAEELQIENPSNLKKHELIFAILKATAKDDKAIFGNGVLEILPD
GFGFLRSPLYNYLPGADDIYVSPSQIRKFGLRKGDSVEGEIRPPKEGERYFALVKVNEIN
GQSPEKHKKTVLFDNLTPLYPEKKINLEYHPTNYSTRLIDLFVPQGFGQRCLIVAPPKAG
KTVLLQDIANAITTNHPDAVLIVLLIDERPEEVTDMRRNVNAEVVSSTFDEPATRHVQVA
EMVIEKAKRLTEAGKDVIILLDSITRLARAYNTVVPPSGKILSGGVDSNALHKPKRFFGS
ARNIEGGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIQLDRKLLEKRIFPALDINKS
STRKEDLLMAPNDLQRSYLLRKVLHPMAPIDAMEFILSRVTKTKSNSDFLDSMNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaacgatcttagagaaaaagaaattgccgaactcacgaccatggccgaagag
ttacagattgaaaacccaagtaacttaaagaaacacgaactcatcttcgctatcttaaaa
gcgacagcaaaagatgataaagcgattttcggaaacggcgttcttgagattctaccagac
ggtttcggattccttagatcaccactttataactaccttccgggtgccgatgatatttac
gtatctccatctcagatcagaaaattcggtctaagaaaaggggactctgtagaaggtgaa
atcagaccaccgaaagaaggtgagagatacttcgccctagttaaagtaaatgaaatcaac
ggacagtctcctgaaaaacataagaagacagttctctttgataacttaactccgctttac
ccagaaaagaaaatcaaccttgagtaccacccgacaaactactcaactcgtcttatcgac
ctgtttgttccacaagggtttggtcaacgctgtcttatcgtagctcctccaaaagctggt
aagactgtacttcttcaagatatcgctaacgctattacaactaaccatccagatgctgtt
ctgatcgttcttctaattgacgaacgtccagaggaagtaactgacatgagaagaaacgtt
aacgctgaagttgtttcttcaacgttcgatgaacctgctactcgccacgttcaagttgct
gagatggttatcgaaaaagcaaaacgtttaactgaagctggcaaagatgttatcatcctt
ctggactcgatcactcgtcttgcccgcgcatacaacacagttgttccaccatcagggaaa
atcctttcgggtggggttgactcaaacgctcttcacaaaccaaaaagattcttcggatct
gctcgtaacatcgaaggtggtggatctcttacgatcatcgctacagctcttatcgataca
ggttcaagaatggatgaagttatctttgaagaattcaaaggtacaggtaactctgaaatc
cagcttgatagaaaacttcttgaaaagagaattttcccagctcttgatatcaacaaatct
tcaactcgtaaggaagacctgcttatggcaccaaacgatctacaaagatcgtacctgctt
cgcaaggttcttcacccaatggcgccaatcgacgctatggaatttatcctgagccgtgta
acgaagacaaaatcaaactcggacttcctggattcaatgaactcataa
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