Bacillus anthracis H9401: H9401_5088
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Entry
H9401_5088 CDS
T02028
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bax
Bacillus anthracis H9401
Pathway
bax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9401_5088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bax03019
]
H9401_5088
03016 Transfer RNA biogenesis [BR:
bax03016
]
H9401_5088
Enzymes [BR:
bax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H9401_5088
Messenger RNA biogenesis [BR:
bax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9401_5088
Transfer RNA biogenesis [BR:
bax03016
]
Prokaryotic type
tRNA degradation factors
H9401_5088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
S1_RRP5
S1CSD-TOTE-2
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
AFH86474
LinkDB
All DBs
Position
complement(4827025..4829451)
Genome browser
AA seq
808 aa
AA seq
DB search
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLIRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFVLKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELMKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEI
AEHSSNMERRAVEAERETDELKKAEYMLDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEQHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRGGKGKGRGSASASTSASQP
GKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttgggattgaaggttccgagggc
tttaaagatttcgtaaaggcacttgtaacgatggaagaaaagggactcgttattcgtact
cgtagcaaccgttacggtcttcctgaaaagatgaatttaatacgtggtaagttaattgga
catgcacgtggttttgcatttgttgtaccagacgagaagaaaacgggagacgatgatctt
ttcatcccacctacagaattaaacggtgcgcttcatggtgatacagtattagcacgcctt
agttcccaatcgagtggttcgcgtcaagaaggttctattgtacgcattttagaacgtgga
acgaaagaactagttggtacatatacagaatcgaaaaactttggatttgttatacctgac
aataagcgctggacgagtgacattttcgtattgaaaagtgcatcaatgggtgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagtgcagaaggt
gaagttattcaaattctaggtcataaaaatgacccaggagtagatattttatctgttatt
cataaacatcatttacctttagcattcccagaggaagtgatggaacacgcaaacagtgta
ccagaaacgatttcagaggaagatttaaaagatcgccgtgacctgcgtgaccaaatgatc
gtaacaattgacggtgcagacgcaaaagatttagatgacgctgttacagtaacaaagctt
gagaacggtaactataaacttggcgttcatattgcggatgtaagtcattacgttcaagaa
ggttctccaattgatgtagaagcagcggagagagcgacgagtgtatatcttgttgaccgt
gtaattccaatgatcccgcatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacgttatcttgtgaaatggaaattaacaatttaggtgacgttgtaaaacac
gagattttccaaagtgtgattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagaattaatgaaacgctatgagccgctcgtaccgatgttt
aaagagatggggcaattagcacaaattttacgtgaaaaacgtatgcgccgcggggcaatc
gactttgactttaaagaagcgaaagtattagtagatgaagaaggaaaaccgacagatgtt
gttatgcgtgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcaaac
gaaacagtagcagagcacttccactggatgaacgtaccattcatgtaccgtgtccatgaa
gatccgaaagaagataagttagagcgtttcttcgagtttgtaacgaacttcggatatgca
gtaaaaggacgtgcgaatgaagtacatcctcgcgcgctacaacaaattcttgaaatggtt
caaggacagccagaagaagtagtaatctcaacagttatgcttcgttctatgaagcaagca
cgttacgatgcagatagcttaggacatttcggtttatcaactgagttctacacacatttc
acatcgccaattcgtcgttacccagatacgattgttcatagattaattcgtgaatacatc
attaacggtaaagtcgacaatgaaacacaagcaaagtggcgtgaaaaattacctgagatt
gcagagcactcttctaatatggagcgtcgtgctgttgaagcagaacgtgaaacagatgag
ctgaaaaaagcagaatatatgcttgataagattggcgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacac
gttagctacttaacggatgattactaccgttacgatgagcagcatttcgcaatgatcgga
gaacgtacaggtaacgtattccgcatcggtgacgaaattacaattcgtgttattaatgta
aacaaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggtacacctcgtcgt
aagttcaaagaccgcccagtcgttattgaacagccaagaacaggtagaaagaaacgcggt
ggacgtagcgagcgcagtaatgagcgcggcggagaacgtggcacaggaagaaaatttgac
cgtggtggcaaagggaaaggaagaggatctgcatccgcatctacgtccgctagccagcca
gggaaaaaagatggtaacggcaagaagaaaaaagcattcttcgaaaacgtaccaggattc
aagaagaaaaagaaaaagcgtaagtaa
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