Bacillus velezensis FZB42: RBAM_000060
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Entry
RBAM_000060 CDS
T00582
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bay
Bacillus velezensis FZB42
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_000060 (gyrB)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_000060 (gyrB)
Enzymes [BR:
bay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBAM_000060 (gyrB)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Topoisomerases
RBAM_000060 (gyrB)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBAM_000060 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABS72454
UniProt:
A7Z0C8
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All DBs
Position
4871..6787
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AA seq
638 aa
AA seq
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MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIVDNSIDEALAGYCTD
INIEIEKDNSITVKDNGRGIPVGIQEKMGRPAVEVIMTVLHAGGKFDGSGYKVSGGLHGV
GASVVNALSTTLDVTVHRDGKIHYQAYERGVPVADLEVIGDTDKTGTITHFVPDPEIFKE
TIVYDYDLLSNRVRELAFLTKGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVV
HEEPIYIEGEKDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRVINDY
ARRKGIFKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGNSEARTITDTLFSSA
LETFLLENPDSARKIVEKGLMAARARMAAKKARELTRRKSALEISNLPGKLADCSSKDPS
ISELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRSMITALGT
GIGEDFNLEKARYHKVVIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKV
QQGKRVEYAYNDKQLDELLKELPQSPKPGLQRYKGLGEMNATQLWETTMDPATRTLLQVN
LEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcagcaaaatagttatgatgagaatcagatacaggtattagaaggtttggaa
gctgttcgaaagagaccggggatgtacatcggatcaactaacagcaaaggccttcaccac
ttggtgtgggaaatcgtcgacaacagtattgacgaagccctggccggttattgtacagat
attaacatcgagattgaaaaagataacagcattaccgttaaggacaacgggcgcggaatt
ccggtcggtatccaggagaagatgggccgccctgcggttgaagttatcatgaccgttctc
cacgccggcggtaaatttgacggaagcggatataaagtatccggcggtcttcacggtgta
ggggcgtccgtcgtaaacgccttgtcgaccactcttgacgttacggttcatcgtgacgga
aaaatccactatcaggcgtacgagcgcggtgtacctgtggctgatcttgaagtgatcggt
gatactgataagaccggaacgattacgcacttcgttccggatccggaaatcttcaaagaa
acaatcgtatacgactatgatctgctttcaaaccgtgtccgggaattggccttcctgaca
aaaggcgtaaacatcacgattgaagacaaacgtgaaggacaagaacggaaaaacgagtac
cactacgaaggcggaatcaaaagctatgttgagtacttaaaccgttccaaagaagtcgtt
catgaagagccgatttatatcgaaggcgagaaagacggcataacggttgaagttgcgttg
caatacaacgacagctatacaagcaacatttattctttcacaaataacatcaacacatac
gaaggcgggacgcacgaagccggatttaaaaccggtctgacccgtgtcataaacgactat
gcaagaagaaaagggattttcaaagaaaatgatccgaatttaagcggggatgatgtgaga
gaagggctgactgccattatttcaattaagcaccctgatccgcaattcgaagggcagacg
aaaacgaagctcggcaactccgaagcgagaacgatcactgatacgctgttttcttctgcg
ctggaaacattccttcttgaaaatccggactcagcccgcaaaatcgttgaaaaaggttta
atggccgcaagagcgcggatggcagcgaaaaaagcgcgggaattgacccgccgcaaaagt
gcgcttgagatttccaatctgccgggcaaactggcggactgttcttctaaagatccgagc
atttccgagctgtatatcgtagagggtgactctgcgggcggatcagcgaaacagggacgg
gaccgtcatttccaagccattctgccgctgcgcggtaagattctgaacgttgagaaagcc
agacttgataaaattctctcaaacaatgaggtcagatcaatgatcacggccctcggaaca
ggaatcggagaagattttaatcttgaaaaagcgcgttatcataaagtggtcatcatgacg
gatgccgatgttgacggcgcccacatcagaacgcttttattaacgttcttctacagatac
atgcgggaaatcatcgaaaacggctatgtctacattgcccagccgccgctttataaagtg
cagcagggaaaacgggtggaatacgcttataacgataagcagcttgatgagctgttaaaa
gagcttccgcaatcacctaagcccggcctccagcgttataaaggtcttggagaaatgaac
gcgactcagctttgggaaacgacaatggaccctgcgaccagaacgcttctgcaagtcaat
cttgaagatgcaatggacgctgacgagacttttgaaatgctgatgggtgacaaagtagaa
ccgcggagaaacttcatagaagcaaacgccagatacgtgaaaaatcttgatatttaa
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