Bacillus velezensis FZB42: RBAM_000250
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Entry
RBAM_000250 CDS
T00582
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03030
DNA replication
bay03430
Mismatch repair
bay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBAM_000250 (dnaX)
03430 Mismatch repair
RBAM_000250 (dnaX)
03440 Homologous recombination
RBAM_000250 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_000250 (dnaX)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_000250 (dnaX)
Enzymes [BR:
bay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBAM_000250 (dnaX)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBAM_000250 (dnaX)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBAM_000250 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
TIP49
AAA_assoc_2
AAA_16
AAA_5
AAA_22
AAA_19
DnaX_C
RCF1-5-like_lid
Rad17
PIF1
DNA_pol3_delta_C
Mg_chelatase
AAA_28
AAA_7
AAA_14
DUF815
AAA_24
TsaE
HMMR_C
Motif
Other DBs
NCBI-ProteinID:
ABS72468
UniProt:
A7Z0E2
LinkDB
All DBs
Position
27858..29549
Genome browser
AA seq
563 aa
AA seq
DB search
MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITS
KAIVGRMKTIVDAEQLKVEEGALDIIASAADGGMRDALSLLDQAVSFSGEELSVDDALLI
TGAVSQHYIGKLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPG
LEGVLEKVKVDETFRNLSGDIPAPALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT
AQQSAGDIPEVGMLMNKIQQLEQEVERLKTSGVKVQMESAPKEAPRPQKGGKSHYKAPVG
RIHEILKEATRPELEQLKSSWGKLLAHLKQQNKVSHAALLNDSEPVAAAQKAFVLKFKYE
IHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEP
AEEDPLIAEAKKLVGADLIEIKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgggttaccaagctttatatcgagtatttaggcctcagcagtttgaagatgtggtcgga
caggaacacattacgaaaacgctgcaaaatgcccttttgcaaaagaaattttctcatgca
tatctgttttctggaccgcggggaacgggaaaaaccagtgcagctaaaatatttgcgaaa
gcagtcaactgtgagcacgcccccgtagaagaaccgtgcaatgaatgtgcggcgtgcaag
gggatcacaaacggctctatatcagatgtgattgaaatagatgcggcgtcgaataacggc
gtagacgaaatccgcgacatccgtgacaaagtaaaattcgccccgtcggccgtcacctac
aaagtatatattatagatgaggtgcatatgctctctatcggcgcattcaatgcgcttctg
aaaacgctggaagaaccgccggcacattgcattttcatattagctacgactgagcctcat
aagattcctttaaccattatctccagatgtcagcgttttgacttcaaacggattacatcc
aaagcaattgtcggacgaatgaagacaatcgtcgatgcagagcagctgaaggtggaagaa
ggagcccttgatatcatagcgagtgctgcggacggaggaatgagggacgcgctgagcctg
ctcgatcaagccgtatcattcagcggcgaggagctgtcggtggatgatgcattgctcatt
accggagccgtttctcagcactatattggaaaactggcatctgctcttcaccgcaaacag
gtttccgaggcattggaaacactgaatgaattgctccagcaagggaaagatgcggccaaa
ctgattgaagatatgattttctatttcagggatatgctcttgtaccaggccgctcccggt
ttagaaggagtcctggagaaggtgaaggtcgatgaaacgtttcggaatctgagcggtgac
ataccggcccccgctttatatgagatgattgatatcctgaacaaaagccatcaggaaatg
aagtggacgaaccacccaagaatcttttttgaagtggctgtcgtgaaaatatgccagacg
gcacagcaatccgccggagacatccctgaggtcggcatgctgatgaataagattcagcag
cttgagcaggaagtagaaaggctgaaaacctctggtgtgaaggttcagatggaaagcgct
ccgaaagaagctccgcgtcctcaaaaaggcggaaaaagccattacaaagctccggtcgga
agaattcatgagatattgaaggaagccaccagacctgaacttgaacagcttaaaagcagc
tggggcaagctgctggcacacctgaaacagcagaataaggtgtctcatgcggctctgttg
aatgacagtgaaccggtggctgctgctcaaaaggcatttgtgcttaaatttaaatacgaa
atccattgtaaaatggttgcagaagacaataacggagtccgtacgaatcttgaacagatt
ctcgaatcaatgctcgggaaaagaatggatttgattggcgttccggaagcacaatggggt
aaaataagagaagaatttttaaatgatcaccagcaggaaagtgaaggatcaaacgaaccg
gctgaagaagatccgctgattgcagaggcgaaaaaacttgtcggagcggatttaatcgaa
ataaaagactaa
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