Bacillus velezensis FZB42: RBAM_000400
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Entry
RBAM_000400 CDS
T00582
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03030
DNA replication
bay03430
Mismatch repair
bay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBAM_000400 (holB)
03430 Mismatch repair
RBAM_000400 (holB)
03440 Homologous recombination
RBAM_000400 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_000400 (holB)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_000400 (holB)
Enzymes [BR:
bay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBAM_000400 (holB)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBAM_000400 (holB)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBAM_000400 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
ABS72480
UniProt:
A7Z0F4
LinkDB
All DBs
Position
41422..42411
Genome browser
AA seq
329 aa
AA seq
DB search
MAISWKEMTGQQPRVMRLLHNSIEKKRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEDGT
EPCGECRNCKRIESGNHPDLHVVQPDGLSIKKAQIQSLQEEFSKTGLESHKKLYIISHAD
QMTTNAANSLLKFLEEPSQDTIAILITEQLHRILDTIVSRCQVLPFQPLQPKAIEERLIE
QEVSPHMARLLANMTNNIAEAVELSRNDEFAESRAKVIKLYEVLHQRKGHAFFFIQDQWV
PFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQFTQQSVTNQIL
AVLEAKKRLHSNVNVQGLMEHLVLTLQEG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatcatggaaggaaatgaccgggcagcagcccagagtgatgcggcttttgcat
aacagcattgaaaagaaaaggctttctcacgcatatctgtttgaaggcaaaaaaggtacg
ggtaaattggatgccgcactgcttctcgcaaaaagctttttttgccttgaagacgggact
gagccttgcggggagtgccggaactgtaagcgtattgaatccggaaaccatcccgacctg
catgtggttcagcccgacggattatccattaaaaaggctcagatccaatcgcttcaggaa
gagttttctaaaacaggacttgaatcgcataaaaagctgtacattatatcccatgcggat
caaatgacgacaaatgcggcaaacagtctgctgaaatttttagaggagccgagtcaagat
accatcgcaattcttattactgagcagctccaccgaatactggataccatcgtttcgaga
tgtcaggttcttccgttccagccgcttcagccgaaagccatagaagaaagactgattgaa
caggaagtgagccctcacatggcccggctcttagcaaatatgacaaataatattgcggaa
gcagtcgaattaagtcgaaatgatgagtttgcagagtccagagcgaaagtgataaaattg
tatgaagtcttacatcagcggaaagggcatgcctttttcttcattcaggatcagtgggtg
ccctttttcaaagaaaaaacccatcaagaaatgggtcttgatatgctcttattgatatac
cgtgatgtattatccatccaaattggaaatgaagataaactgatttatcaagacttattc
caatcaataaaacagcatgcgctgcaatttacacaacaaagcgttacgaaccaaattctc
gctgttttagaagcaaaaaaacggcttcattccaatgtgaatgtgcagggattaatggag
cacttggtgttaacgttgcaggagggataa
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