Bacillus velezensis FZB42: RBAM_002160
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Entry
RBAM_002160 CDS
T00582
Name
(GenBank) penicillin binding protein PBP4B
KO
K21469
serine-type D-Ala-D-Ala carboxypeptidase [EC:
3.4.16.4
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay00550
Peptidoglycan biosynthesis
bay01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBAM_002160
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bay01002
]
RBAM_002160
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bay01011
]
RBAM_002160
Enzymes [BR:
bay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBAM_002160
Peptidases and inhibitors [BR:
bay01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
RBAM_002160
Peptidoglycan biosynthesis and degradation proteins [BR:
bay01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
RBAM_002160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
DUF7334
DnaJ-like_C11_C
Motif
Other DBs
NCBI-ProteinID:
ABS72620
UniProt:
A7Z0U4
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All DBs
Position
complement(193108..194391)
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AA seq
427 aa
AA seq
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MKTLTAAILTMVISLSFLPQHKAEAQSKLYDAAKLRKVDQMIEKDIAAGFPGAVLVVVKD
GRVIKKKAYGYSKKYDGNTLLSRPKKMKTSTMFDLASNTKMYAANFALQRLVSQGKLDVY
QKVSAYLPDFKDRKSDPIQEKDRIRVIDVLQHQSGLPASFYFYQPDTAGPLYSQERDKTI
RFLTQIPLAYKPGTKHVYSDIGYMLLGCIIENITGKTLDAYAEQELYKPLKLTHTLFNPL
QKGFKEKAFAATERLGNTRDGVIHFPHIRTYTLQGEVHDEKAFYSMGGVSGHAGLFSRAD
DMAVLLQVMLNGGSYKHVSLFNKRTADLFTTAASSDPTFALGWRKNGSPDMEWMFGPYAS
WQAYGHTGWTGTITIIDPAYKLGIALLTNKKHSPVVSPGENPNVFEGDLFPTGSYGRVIK
TIYEAIE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactgacagccgccatactcacaatggtcatcagcctctcttttctgccgcag
cacaaagccgaagcccaatccaaattatacgacgcagcaaagctcagaaaggttgatcaa
atgattgaaaaagacatcgcagcaggattccccggagccgtcctcgtcgtcgtaaaggac
ggacgggtgatcaaaaagaaagcatacggctacagcaaaaaatatgacgggaacaccctt
ttatcccgtccgaaaaaaatgaaaacatcaaccatgtttgatctagcttccaatacaaaa
atgtacgcggcgaattttgcattacagcgactcgtcagccagggaaagcttgatgtgtat
caaaaagtctcggcttaccttcctgatttcaaagacagaaaaagcgatccgattcaagaa
aaagaccgcattcgcgtcatcgatgtgctccagcatcaatccggtctgccggcaagcttt
tatttctatcagccggacaccgcaggccctttgtattcacaagaacgggataaaacgatc
cgttttctcactcaaatcccgcttgcatacaaaccgggaacaaaacacgtatacagcgat
atcggttacatgcttctcggctgcatcattgaaaacataaccggaaaaacccttgatgcc
tatgcggaacaagaactgtacaaaccgctgaaactgacgcacacactgttcaatccgctg
caaaaaggttttaaagaaaaagcattcgcagctactgaacgtttaggcaacacacgtgac
ggagtcatccattttcctcacatcaggacgtatacgctgcagggggaagttcacgatgaa
aaagcattttactcaatgggaggggtgtccggtcacgccgggctgttttccagagctgat
gacatggccgtccttcttcaagtcatgctgaacggaggcagttataaacacgtttctctc
ttcaataaaaggacggccgatttgttcacaacggcggcatcctctgatccgactttcgct
ctcggctggcggaaaaacggcagcccggatatggagtggatgttcggcccttatgcaagc
tggcaggcatatggccatacaggatggaccggcaccatcacgattattgatcccgcttat
aagctggggatcgcacttttgaccaataaaaagcattcccccgtcgtcagtcccggtgaa
aacccgaatgtttttgaaggggatctttttccgaccggaagctacggccgcgtcataaaa
acgatttatgaagccattgaatga
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