Bacillus velezensis FZB42: RBAM_012580
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Entry
RBAM_012580 CDS
T00582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
bay
Bacillus velezensis FZB42
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bay03021
]
RBAM_012580
Transcription machinery [BR:
bay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBAM_012580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_38
HTH_23
GerE
HTH_36
PhyR_sigma-like
UPF0122
HTH_29
Fe_dep_repress
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABS73621
UniProt:
A7Z3P5
LinkDB
All DBs
Position
1223390..1223902
Genome browser
AA seq
170 aa
AA seq
DB search
MEDLLFEYKRTLKETKKWYKQLEEADETVLTSEELKDKKIIRTIITDVEYVIEWLEKGRQ
PGIRRAIDRRDAYQRMLIKDPRIIETYSQALMFEPSANVTEEDRIRLRDALAVLTDREKE
MLLLHKAECFSYERIAALLNVKKSTVQTTVKRALLKIQKQQEQRNQSPAS
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggaagacttactatttgaatataaacgcacgctgaaagagacgaaaaagtggtacaag
cagctggaggaagccgatgaaacggtgcttacttcagaagaactgaaagataaaaaaatc
atcagaacgatcattacagatgtggaatatgtcatcgaatggcttgaaaaaggccggcag
cccggcataagaagagcgatagaccgcagagacgcttatcagagaatgctgattaaagat
ccgagaatcatagaaacctattcgcaggcgctgatgtttgaaccttccgcaaatgtgact
gaagaagacagaatcagactgcgggacgcattagccgttttaacggatagagaaaaagaa
atgctgctgctccacaaagcggaatgcttttcatatgaacggattgccgccttgctgaat
gtaaagaaatcaaccgtacagacgacggtcaaacgggcgcttctaaaaatacaaaaacag
caggaacaaagaaatcaatcgcctgcttcataa
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