Bacillus velezensis FZB42: RBAM_013190
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Entry
RBAM_013190 CDS
T00582
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RBAM_013190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_013190
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RBAM_013190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF6058
Phage_ssDNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABS73682
UniProt:
A7Z3V6
LinkDB
All DBs
Position
complement(1280954..1281835)
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AA seq
293 aa
AA seq
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MHTMWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPDEI
VKGYEYVKGKYVIMTDEDLKDVKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRTTGKIGIASITIRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVP
EQTAVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPAAAGPR
EDVIDLVSALQASIDRTKRPDREQAAPARTKDAASAGGGGKKQKTTRQKAGTS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatgtggaagggttcgatcagtttcggcctcgtcaatatcccggtcaagctc
tttgcggccactgaagataaagatataaaattccgcagtcttcataaagaagaccatgcg
ccgattaaatacgaaaaaatctgcaccggatgtgaaaaaagtctggaacctgatgaaatt
gtgaaaggctatgagtatgtaaaagggaaatacgtcattatgacagacgaagacttgaaa
gacgtaaaacaggaacatgaagaaaaagcggttgagattgttgactttgtccagctgcag
gaaattgatccgatttattttaaccggtcgtattatgtcgggccgggagataacggcaca
aaagcctatacacttctgcgggaagcgctaaggacgacgggtaaaatcgggattgcctcc
attacgatccgctctaaacagcagcttgcgattcttcgcgtgtatgacaactgcatcgtg
atggaatccattcattatccggatgaagtcagaaatgccggacatgtgccaggcgttccc
gagcagacagccgttaatgaaaaagagctgcagacggcgattacgttaattaatgagctg
acaaccgagtttgacccggaacaatacgaagatacgtaccggaaagcccttctcgctaaa
attaacgataagctcgaacatgaagaagcgggcgtgacaccggctgctgccggcccgcgc
gaagatgtcattgatcttgtcagcgcgcttcaggcaagcattgaccggacgaagcggccg
gatcgcgaacaggctgcgccggcgcggacaaaagacgccgcgtcagcaggcggcggaggc
aaaaagcagaagacgaccagacaaaaagccggaacgtcttaa
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