Bacillus velezensis FZB42: RBAM_015950
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Entry
RBAM_015950 CDS
T00582
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bay
Bacillus velezensis FZB42
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_015950 (topA)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_015950 (topA)
Enzymes [BR:
bay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RBAM_015950 (topA)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Topoisomerases
RBAM_015950 (topA)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBAM_015950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABS73958
UniProt:
A7Z4N2
LinkDB
All DBs
Position
1598950..1601025
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLSSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTITGSFLKGKETFEAGFFGKNGKKLPLKSEEDVKAILAQLKGNKYTVDK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAVEEASAFIDQAYGKEYLAGKRKPAKKNENAQDAHEAIRPTSVLRKPADLK
AVLGRDQLRLYKLIWERFVASQMAPAVLDTMSVDLSNNGLTFRANGSKVKFAGFMKVYVE
GKDDQLEEKDRMLPDLKEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEDGQ
TEWVQIIDSFYTDFEKRVKKAEAEMKEVEIEPEYADEDCELCGSRMVYKMGRYGKFMACS
NFPDCRNTKPIVKQIGVKCPKCHEGNIVERKSKKKRIFYGCDRYPECDFVSWDKPIERKC
PKCENMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgccggcaaaggcgaaaacgattgaacgttat
ttagggaagaaatataaagtcaaagcttcaatgggacatgtccgggatcttccgaaaagt
caaatgggagttgacatcgaacagaactttgaaccgaaatatattacgatccgcggaaaa
ggccctgttttaaaagaattaaaaacagcggcaaagaaagcaaaaaaagtctatctcgcg
gccgaccccgacagagaaggggaagcgattgcatggcatctcgcacacagtcttgatctg
gatctcagctcggactgccgggtcgtctttaatgaaataacgaaagacgccattaaagaa
tcatttaaacatccgcgcatgattaatatggatcttgtcgatgcacagcaggcgcgccgc
atattagacagactcgtcggatacaaaatcagcccgattctttggaaaaaagtaaaaaaa
ggcctcagtgcgggccgtgtgcaatccgttgcgctccggctgatcatcgaccgggaaaag
gaaatcaacgattttaaacctgaagagtactggacgattaccggctcatttttaaaagga
aaagagacgtttgaagccggatttttcggaaaaaacggcaaaaagcttcctttaaaaagc
gaagaagacgtaaaagccatccttgctcagctgaaaggcaataagtatacagttgacaag
gttacgaaaaaagagcgcaaacgaaatcccgctctgccgtttacaacgtccactctgcag
caggaggctgcaagaaagctgaatttcagagcgaagaaaacgatgatgatcgcgcagcaa
ttatatgaaggaattgatctcggcaaagaagggacagtcgggctcatcacgtatatgaga
acggactcaacgcggatttccaatacagccgttgaagaagcgtcagcttttattgatcag
gcgtacggaaaagagtacttagcgggaaaacggaaaccggcaaagaaaaatgaaaacgct
caagatgcccacgaagcgatccgcccgacttcggtgctcagaaaacctgccgacttaaaa
gcggtgcttggaagagaccagctcagattatacaagctgatttgggagcgctttgttgca
agccagatggcgcctgccgtccttgatacgatgagcgtcgatctcagcaataacggattg
acattccgggcaaacggaagtaaagtcaaattcgccggcttcatgaaagtctatgtagag
ggtaaagacgatcagctggaagaaaaagaccgcatgcttccggaccttaaagagggagac
acggttttatcgaaagatattgagcctgagcagcactttactcagccgcctccgcgttat
acagaggcgcgcctggttaaaacgcttgaagaactggggatcggccgtccttcgacatat
gcgccgactcttgacaccatccagcgccgcggttacgtgggactagacaataaacggttt
gtgccgactgagcttgggcagatcgtgctggatcttatcatggagtttttcccggaaatc
attaacgttgaattcacggctaaaatggaaagagatcttgaccatgttgaagatggccag
acagaatgggttcaaatcattgacagcttctatactgatttcgaaaaacgcgtgaaaaaa
gcggaagccgaaatgaaagaagtggaaattgaacctgaatacgccgatgaagattgtgag
ttatgcggctcccggatggtttataaaatgggccgatacggcaaatttatggcgtgctcc
aacttccctgactgccggaatacaaaaccgattgtcaaacaaatcggcgtaaaatgtcct
aagtgccatgaaggaaacattgtcgaacgaaaatcaaaaaagaaacgcatcttttacggc
tgtgaccgttatcctgaatgcgacttcgtatcttgggacaaaccgattgaacgaaaatgc
ccgaaatgtgaaaatatgctcgtagagaaaaagcttaaaaaaggcatacaagtccaatgc
gtcgaatgcgattataaggaagaaccacagaagtag
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