Bacillus velezensis FZB42: RBAM_016800
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Entry
RBAM_016800 CDS
T00582
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBAM_016800 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bay03019
]
RBAM_016800 (rny)
Messenger RNA biogenesis [BR:
bay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBAM_016800 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
ABS74043
UniProt:
A7Z4W7
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All DBs
Position
1685917..1687476
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AA seq
519 aa
AA seq
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MTPMTVLISILLTLLGLVVGYYVRKTIAEAKIAGARGAAEQILEDAKRDAEALKKEALLE
AKDEIHTLRIDAEQEVRERRNELQKQENRLLQKEENLDRKHEGIDKREAMLEKKDHSLNE
RQQHIEEMESKVDEMIRMQQSELERISSLTRDEAKQIILDRVENELSHDIAIMTKETENR
AKEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDDYIRE
MGEQTTFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAFLAGLMASELGEDAKLA
KRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDEEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVKPDSIND
LEAHRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaatgacggttctcatctccattttgctgactctgctcggtttagttgttggc
tactatgttcgtaaaaccattgccgaagcaaagattgcgggcgcacgcggtgctgccgag
caaatccttgaagatgcaaagcgtgatgctgaagcactgaaaaaagaagctctgcttgaa
gcaaaggacgaaatccatacacttcgaatagatgctgaacaggaagttcgtgaaagacga
aatgagcttcaaaaacaagaaaaccgtttacttcaaaaagaagaaaatcttgaccgtaaa
catgaaggaattgataaacgggaagcgatgttggagaagaaagatcattctctgaatgaa
cgacaacaacatattgaagagatggaaagcaaagtggatgagatgattcgtatgcagcag
tcagaactcgaacgcatttcgagcctgacacgggatgaagcgaaacaaatcattcttgac
cgggttgaaaatgagctttcacatgacatcgccatcatgacaaaagaaaccgaaaaccgt
gcgaaagaagaggcagataaaaaggcgaaaaacattctgtcgcttgctttgcagcgctgt
gcagcagatcatgttgccgaaacgacggtatcggtcgtcaatcttccgaatgatgagatg
aaaggacgtatcatcggccgtgaagggcgtaacattcgtacgcttgaaacgcttacaggt
attgacctgattattgatgacacacctgaagcagtcattctttccggatttgatccgatc
agacgggagacggcaagaatcgctcttgataaactcgttcaggatggccgtattcacccg
gcgcgcattgaagaaatggttgaaaaatcccgccgtgaggtagatgactatatccgggaa
atgggtgagcagacgacgtttgaagtcggcgttcacggcctccacccggatctgatcaag
atcctcggccggttgaaattccgtacaagctacgggcagaacgtactgaaacattctatg
gaagttgcgtttttagccggtttaatggcttcagagcttggagaagatgcaaagcttgcc
aagcgggccggtcttctgcatgacatcggaaaagcaattgaccatgaagtggaaggaagc
cacgtggaaatcggagtggagcttgcgaccaaatataaagagcatccagtcgtcattaac
agtattgcgtcacaccacggagacgaagagccgacttccattatcgccgttctggtcgct
gccgctgatgcactgtcagccgcaagaccgggcgcgagaagtgaaacgctcgaaaactat
atccgcagacttgaaaagcttgaagaaatctccgagtcttacgaaggtgttgaaaaatca
tttgcgattcaggccggccgtgaagttcgcatcatggtgaagccggactccattaatgat
ttagaagcccatcgtttggcacgtgatatccgtaaacgaattgaggacgagcttgattat
ccgggacacattaaagtgaccgtgatcagagaaactcgagccgtagagtatgcaaaataa
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