Bacillus velezensis FZB42: RBAM_021170
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Entry
RBAM_021170 CDS
T00582
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBAM_021170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bay03019
]
RBAM_021170
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_021170
Enzymes [BR:
bay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBAM_021170
Messenger RNA biogenesis [BR:
bay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBAM_021170
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBAM_021170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
ABS74478
UniProt:
A7Z652
LinkDB
All DBs
Position
complement(2212291..2213781)
Genome browser
AA seq
496 aa
AA seq
DB search
MTELHKALSKYFGLHSFKKGQEEIMTSVLQKKDTIAMLPTGGGKSLCYQLPGYMMDGLVL
IISPLLSLMEDQVQQLKAKGEKRVAALNSMLNSAERHFILSNISRYKFLYMSPEALSSPY
VLNRLKNVPVSLFVIDEAHCISEWGHDFRPDYSKLGPFRQALGKPPVLALTATATKETLR
DVTDVLGLEHAVRHLYSVNRPNILLAAEHLADNAEKISRLTELAEKLEGPGIIYCPTRKW
AEELAAELNEKTGKRTDYYHGGMDTGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRF
VIHFYPPQTAEAFMQEIGRAGRDGSPSVSILLRAPGDTELQQQIIQTESLSDYDLEGILA
IIRDAGTGDERKLRDVLINKGVQETQARTAVHLYLQGKTTKEQLQEELTYRVEKKLRKMN
RFSALLERKECIREALLSYFDEPYEPDGQTGQCCSSCGLDLAPYEQKGERKNMERFEDWK
LELGRIFGSESAGEFS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcataaagctttatccaagtattttggtttgcattcctttaaaaaaggg
caggaagagattatgactagcgtgctccaaaaaaaggatacgatcgccatgcttccgacc
ggcgggggaaaatcattatgctatcagctcccgggttacatgatggacgggctggtgctg
attatttcgccgctcctttcattaatggaagatcaggtgcagcagctgaaagcgaaagga
gaaaagcgggttgcggcattaaacagcatgctgaattccgcagagcggcattttatcctc
agcaacatcagccggtataaatttctctatatgtctcctgaagccctttcttcaccttat
gtgctgaaccgtttgaaaaatgtcccggtcagtttatttgttattgatgaggctcattgc
atatcagaatggggacatgatttcaggcctgattactcgaagctcggacctttcaggcag
gcactcggaaagccgcctgtattggcgctgaccgcaacagcgacaaaagaaacgctcaga
gacgtgacggatgtgctcggacttgagcatgcggtgcgtcatctttattcagtcaaccgg
ccgaatattctcctggcggcagaacatttggcggataatgccgaaaaaataagcaggctc
acggagcttgccgaaaagcttgaaggcccgggtatcatatattgtccgaccagaaaatgg
gcggaagagcttgcggctgagctgaacgaaaaaacgggaaagcggacggattattatcac
ggcggaatggatacaggcgacaggattttaatccagcagcaatttatccataaccagctt
gattgcatctgctgcaccaatgcgttcggcatgggtgtggataagtcagatatccgcttt
gtcattcacttttatcctccccaaacggccgaggcctttatgcaggaaatcggcagagcg
ggacgcgacggcagcccgagtgtcagtattttgctgagggcgcccggcgataccgagctt
cagcagcagattattcagacagaaagcctgtctgattatgacctggaaggcattttggct
atcatacgggatgccggtacgggtgatgaacgaaagcttcgggacgttctgatcaataaa
ggcgtccaggaaacacaggcgcgaacggccgtccatctgtatctgcaaggaaaaaccaca
aaagagcagctgcaggaagaactgacataccgcgtggaaaagaagctgcgtaaaatgaat
cgtttttcggcgttattagagcggaaagaatgtataagagaagcgctgctgtcttatttt
gatgaaccgtatgagcctgatggtcaaaccggacaatgctgcagcagctgcggacttgat
ctggctccgtacgagcaaaaaggagaacgtaaaaatatggaacggtttgaagattggaag
ctggaattaggccggattttcggatcagagtctgcgggtgagttcagctga
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