KEGG   Bacillus velezensis FZB42: RBAM_023860
Entry
RBAM_023860       CDS       T00582                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
bay  Bacillus velezensis FZB42
Pathway
bay03030  DNA replication
bay03430  Mismatch repair
bay03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RBAM_023860 (holA)
   03430 Mismatch repair
    RBAM_023860 (holA)
   03440 Homologous recombination
    RBAM_023860 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bay03032]
    RBAM_023860 (holA)
   03400 DNA repair and recombination proteins [BR:bay03400]
    RBAM_023860 (holA)
Enzymes [BR:bay01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RBAM_023860 (holA)
DNA replication proteins [BR:bay03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RBAM_023860 (holA)
DNA repair and recombination proteins [BR:bay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RBAM_023860 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_delta DUF4704 V-ATPase_G_2 Ribonuc_red_2_N DUF1319
Other DBs
NCBI-ProteinID: ABS74746
UniProt: A7Z6X0
LinkDB
Position
complement(2505629..2506651)
AA seq 340 aa
MVFDVWKALKKGDVRSVYCLYGKETYLLQETVSRIRQAVVDEETKDFNLSVFDLEEDPLD
QAVTDAETFPFMGEKRLVIVKNPSFLTGEKKKEKIEHNTAALETYLKEPAPYTVFVIVAP
YEKLDERKKLTKALKQKALMIEAKELNAKETTDFTINLAKSENKMIDTEAAEHLVLLANG
HLSSIYQEIQKLSAYTGDRHEITLEDVRELVARSLEQNIFELINKIVNRKRTESLQIFYD
LLKQNEEPIKIMALIANQFRLIMQTKYFAGQGYGQKQIASNLKVHPFRVKLAMDQARLFS
EEELRRIIERLAVMDYEMKTGKKDKQLLLELFLLELLRTE
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggtatttgatgtttggaaagccctgaaaaaaggggatgtccgctccgtttattgctta
tacggaaaagaaacgtatctgctccaagaaactgtcagccggatcagacaagctgtcgtt
gatgaggagacaaaggattttaacctgtctgtttttgatcttgaagaagatccgcttgac
caggccgtaaccgatgcggaaacgtttccgtttatgggagagaagcggctggtcatcgta
aaaaatccgtcttttttaacaggggaaaaaaagaaagaaaaaatagagcataatacagcc
gctctggagacttatctgaaggagcctgcgccttatacggtctttgtgattgtggctccg
tacgagaagctggacgaacggaaaaagctgacgaaagcgctgaagcaaaaagcccttatg
attgaagctaaggagctgaatgcaaaggagacgactgattttacgattaatctggcgaaa
tccgaaaataaaatgatcgatacagaagctgccgagcatttggttctgcttgcaaacggc
catctgtcatccatatatcaggaaatacaaaaactctccgcctacaccggtgacagacat
gagatcacacttgaagatgtccgggagctcgtcgcaagaagtttggagcagaatattttt
gagctgatcaacaaaatcgtgaaccgaaaacggacggaaagtcttcaaatattttatgat
cttttaaaacaaaacgaagaaccgatcaaaattatggcgctgatcgccaaccaattccgt
ctgattatgcagacaaagtattttgcgggacaaggatacggccaaaagcaaatcgcttcc
aacttaaaggtgcaccccttccgggtaaaactggcgatggatcaggcgaggcttttttct
gaagaagagctgcggcgtattatagaaagactcgcggtgatggattatgaaatgaaaacg
gggaaaaaggacaagcagctcttgctggaactctttctccttgagcttctccggactgaa
tga

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