Bacillus velezensis FZB42: RBAM_025550
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Entry
RBAM_025550 CDS
T00582
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBAM_025550 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_025550 (uvrC)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBAM_025550 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
UVR
HHH_5
HHH_2
GlutR_N
DUF7508
GIY_YIG_2
DUF2115
T4_Rnl2_C
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ABS74913
UniProt:
A7Z7D7
LinkDB
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Position
complement(2674540..2676312)
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AA seq
590 aa
AA seq
DB search
MNKQLKEKLALLPDQPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEI
EDFEYIVTSSNLEALILEMNLIKKYDPKYNVMLKDDKTYPFIKITHERHPRLIVTRNVKK
DKGRYFGPYPNVQAARETKKLLDRLYPLRKCSKLPDRVCLYYHLGQCLAPCVKDISEETN
REIVEDITRFLKGGHNEIKKELEAKMAEAAEKLEFERAKEFRDQLAHIESTMEKQKMTMN
DLLDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPMYQEADEEFLTFIGQFYSKNNH
FLPKEILVPDSVDRDMITELLETAVHQPKKGPKKELLLLAHKNAKIALREKFSLIERDEE
RSIGAAERLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPNKKEYRKYKIKTVT
GPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVLENELGLDVPVAGLA
KDDKHRTSNLLIGDPLEPVFLERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSVFQSVLD
DIPGIGEKRKKMLLKHFGSVKKMKEASLDDIKKAGVPAAAAQLLFEKLKK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaactgaaagaaaagctggccctccttcccgatcagccgggctgttattta
atgaaagaccgtcaaaaaacagtcatctacgtggggaaagcgaaagtcttgaaaaacagg
gtgcgatcttatttcaccggttctcacgacgcaaaaacccaacggcttgtgtcggagatt
gaggactttgaatatatcgtgacttcctccaatcttgaagcgcttattttggaaatgaat
ctgattaaaaaatacgatccgaaatacaatgtcatgctgaaagatgataaaacctatccc
tttattaaaatcacccatgaacgccatccgcggctgattgtcacccggaatgtcaaaaaa
gacaaaggacgctatttcggcccgtatccgaatgtgcaggcggcgcgggaaacgaaaaaa
ctgctggaccgcctttacccgctcaggaaatgctcaaagcttccggaccgcgtctgtctc
tattatcatctcggacaatgccttgccccatgtgtaaaggatatatctgaggagacaaac
cgcgagattgttgaagacattacccgttttttaaagggagggcataacgaaatcaaaaaa
gagctcgaagcgaaaatggcagaagcggcggaaaagcttgaatttgaacgggctaaagaa
ttccgcgaccagcttgctcacatcgaatcgacgatggagaagcaaaaaatgaccatgaat
gaccttctggaccgcgatgtgtttgcatatgcctacgataaaggctggatgtgcgtccaa
gtctttttcatacgccaaggaaaactgatcgaacgcgacgtcagcatgtttccgatgtat
caggaagcggatgaagaatttctgaccttcatcggccagttctactctaaaaacaatcac
tttctgcctaaggaaattctggtgcctgacagcgttgacagggacatgatcaccgagctg
ttggaaaccgccgtgcatcagccgaaaaaaggcccgaaaaaagagctgcttttgcttgcg
cacaaaaatgcgaaaatcgctctgcgggaaaaattctcgttaatcgagcgggatgaggaa
cggtcaatcggtgcagccgaacggctcggcgaagcgctgaatatttatacgccgcatcgg
attgaagcgtttgacaactccaatattcaaggcacaaaccccgtatcggccatgatcgtc
tttattgacggaaaaccgaataaaaaggaataccgcaaatataaaattaaaaccgtaaca
gggccggatgattacggctcaatgagggaagtcgtcagaagaaggtacacgagggtgctc
cgcgaaaatcttccgctgccggatttaatcatcattgacggcggaaaagggcagattaac
gcggcgcgcgacgtgcttgagaatgagctcggccttgatgtcccggtagcgggattggcg
aaagatgataaacaccgaacatccaaccttttgatcggcgacccgcttgaaccggtgttt
ctggagcggaacagccaagagttttacctgcttcagcgcattcaggacgaagttcaccgt
tttgcgatcagctttcacagacagatccggggaaaaagcgtctttcaatccgttctggat
gatatccccggaatcggcgaaaaacgcaaaaaaatgctcttaaaacatttcggatctgtc
aaaaagatgaaggaagcaagccttgacgatatcaaaaaagcgggtgtgccggccgcggcg
gcccagctgctgtttgaaaaattaaaaaaatag
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