Bacillus velezensis FZB42: RBAM_026130
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Entry
RBAM_026130 CDS
T00582
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03030
DNA replication
bay03410
Base excision repair
bay03420
Nucleotide excision repair
bay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBAM_026130 (polA)
03410 Base excision repair
RBAM_026130 (polA)
03420 Nucleotide excision repair
RBAM_026130 (polA)
03440 Homologous recombination
RBAM_026130 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_026130 (polA)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_026130 (polA)
Enzymes [BR:
bay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBAM_026130 (polA)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RBAM_026130 (polA)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RBAM_026130 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBAM_026130 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Mu_Gam-Sipho_Gp157-TOTE
F420_ligase
HHH
Motif
Other DBs
NCBI-ProteinID:
ABS74971
UniProt:
A7Z7J5
LinkDB
All DBs
Position
complement(2735861..2738500)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYKISRYELPEYEADDIIGTLA
VSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVQEKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYKGFDREQVVAIFKDLGFNTLLERLGEESGETAEENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSETF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLHALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTRK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtaccgagcgttt
tttgcattgccgcttttaagcaatgaaaaaggcatccatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaagatgaaaagccgacccacatgctggtggctttt
gatgcgggaaaaaccactttccgccacagtacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgcgagctccttgatgcctac
aaaatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacccttgcc
gtatctgctgaaaaagaaggtttcgaagtaaaggtagtgtcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattaccgacgtggaa
gattacacgccggagcacgtgcaagaaaagtacggtctgacccctttgcaaatcattgat
atgaagggattaatgggggattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagcttttaaagcagttccattcggttgagaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattacaaagggtttgaccgtgaacaagttgttgccatttttaaagacctcggtttt
aatacgcttcttgagcggctcggtgaagaaagcggcgaaacggcggaagaaaattttgaa
gacatcaatgttgaaacggcagaagaaatcactgaagatatgctcgtttcgccgtccgct
ttggttgttgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaaactttt
aaatcttgggctgaagatgaatcgatgaaaaagtgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcgcttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcggtatacggaaaaggcgcaaagcgcgccgtt
ccggctgaaaaagagcttgccgatcatctcgcgcggaaagcgtctgccgttaacagcctc
cgtgacaaactgctgcacgcgctggaagaaaataatcagcttgaattatatgaagatctc
gaactcccgcttgcgctaattctcggagaaatggaatcaatgggcgtcaaagtggatgtt
gaaagactgaagcgaatgggcgaagagctcaaggcaaagctgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaagctcggcctgccgccagtaaagaaaacaaaaacaggctattccacttca
gctgatgtgcttgagaagctcgcagacaaacatgatatcgtcgcgcacattctgcaatac
agacaaatcggcaaactccaatcgacttatattgaagggctgctgaaagtcacgcgcaag
gattctcataaagtgcatacacgattcaatcaggcattgactcaaaccggacgcctcagc
tcaacggatccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaatt
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtatttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcggcattgtttacggcatcagt
gattacgggctgtcacaaaacctcggcatcacccggaaagaagcgggcgcttttatagac
cgctatttggagagtttcccgggcgtcaaggcgtatatggaagaatcggtgcaggaagcg
aagcaaaaaggatatgtcacgacacttatgcagcgccgccgctatattcctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagaa
aaaaacctgaaggcgcgactgctgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa
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