Bacillus velezensis FZB42: RBAM_026280
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Entry
RBAM_026280 CDS
T00582
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03030
DNA replication
bay03430
Mismatch repair
bay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBAM_026280 (dnaE)
03430 Mismatch repair
RBAM_026280 (dnaE)
03440 Homologous recombination
RBAM_026280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bay03032
]
RBAM_026280 (dnaE)
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_026280 (dnaE)
Enzymes [BR:
bay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBAM_026280 (dnaE)
DNA replication proteins [BR:
bay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBAM_026280 (dnaE)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBAM_026280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABS74986
UniProt:
A7Z7L0
LinkDB
All DBs
Position
complement(2755208..2758546)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAASVKELVTQAKELGYSSLALTDENVMYGAIEFYKACKSNGIK
PIIGLTASIYTDDTELEAHPLILLAETNTGYQNLVKISSALQSMAKGGMKRKWMKSYHEG
LIAITPGENGYIESLLQTGKFEEAVRAAEGFRELFGDGRFYLGYQPFKGHETLSEEILRL
SAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGNLPDLYLRAPEEMAELYT
RHPEAIEAAARIARQCRVDVSLGQTQLPSFPAPDGKSADDYLAEICHEGLRLRFGTPDER
AVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFITDVD
PLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGAMHVAQIITFGTLAAKA
ALRDTGRVFGISPKEADQLARLIPSKPGMTLEEARRQSAQLNRRLSESAVLHKVFQIARK
IEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRN
LTLIESIKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKRLKP
SRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILSDTYGVIVYQEQIMM
IASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIVKFA
NYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGIQVL
PPSINKSGFPFAPENGAVRYSLRAVKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSV
NRKTIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKPKYV
EAEEFPLVDKLRFEKEALGVYFSSHPLSAFRDLLKKRGAQAITAARQMPKGQLSIGALLA
GIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLEEGALLFAAGKMEERQEKT
QFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEFLEKMKRILLEHKGETGVYLYYEKDKQ
TIRLPDTFHIQADHQALYRLKELLGRENVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttgttcacctgcaagtacatagcggctacagtctgttaaacagcgccgcttct
gtaaaagagcttgttacacaagcgaaggaactcggatattcatcattggcgctgacggac
gaaaatgtgatgtacggcgccattgagttttataaagcatgcaaatcaaacggaattaag
ccgattatcggtctgacggcttctatatacacggacgatacggagcttgaagcacatccg
ctcattcttttagcagagacaaacaccggatatcagaacctggtgaaaatctcaagtgcg
ctgcaatccatggcaaagggcggcatgaagcgaaaatggatgaagagctatcatgagggg
ctgatcgccattacgcccggtgaaaacgggtacattgaaagcctgcttcaaaccgggaag
tttgaagaagcggtccgggctgccgaaggattccgggagctgttcggagacggccgtttt
tatttagggtaccagccttttaaaggacatgagacgttatcagaagagattctccgcctg
tcagccgagacggaaatcgctgtctgcgctgcgggggatgtccgttatatcaagaaagaa
gatcaagatgcgtaccgctgtctgtgcgctattaaagccggagagaagtgggaggatcag
agcgggaatctgccggacttatacttgagggcgcctgaagaaatggcagagctttacacg
cggcatccggaagcgattgaagcagccgcgcgtatcgcccggcaatgccgggtcgatgtc
agcctcggacagacacagcttccgtcttttccggcgccggacggcaaatcagccgatgac
tatttggcggagatctgtcatgaggggctgcgcctccgtttcggcactcctgatgagcgc
gctgtccgccggcttgaatatgagctggacgtcatcaggcgcatgaaattcagtgattat
tttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtgacaggtccg
ggaagagggtccgcggcaggctcgcttgtcgcttactcccttttcattaccgacgtggat
ccgcttaaacattctctgctgtttgagagatttcttaatcccgagcggatcagcatgccg
gatattgatatcgatttccctgacacgagaagggatgaggtcattcagtatgtgcaaaat
aagtacggggccatgcacgtcgcccagattatcaccttcgggacattggccgcaaaggcg
gcgttaagggataccgggagagtgttcggaatcagcccgaaagaagccgaccagcttgcc
cgcctgattccgtcaaaaccgggaatgacgcttgaggaagcgaggcggcagtccgctcag
ctgaacaggcggctgtccgaatccgccgttcttcataaagtgtttcagatcgcaaggaaa
attgaaggtcttccgcggcacacgtcaacacacgcggcgggggtcgttctcagtaaagag
ccgctttctgaagttgtccctcttcaagaagggcatgacggcgtgtatttaacgcagtat
gcgatggatcacttggaagatctcggtcttttaaaaatggactttttaggtttgcgcaac
ttgacgcttattgaatccattaaaacgatgattgaaaaagagacgaatacgaaaattgat
ttttccgagatttcttatcaggatgaaaaaacgttctcgctattgtcaaacggtgatacg
acgggtattttccagctggaatcatcaggaatgagaaacgtgctgaagcgcctgaagccg
tcaagactggaagacattgtcgcggttaacgcgctttacaggccgggaccgatggaaaat
attccgttatttatcgaccggaagcacgggcgggcgcgtgtggaagtgccgcacgaggac
gtacgaaatattctcagtgacacttacggcgtcatcgtctatcaagagcagataatgatg
atcgcctcgcgcatggcagggttttcattaggtgaagcggatctgctcagacgggctgtc
agcaaaaagcaaaaggacattctggacagagagcgaagccattttgttgaagggtgctta
aaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtaaaattcgct
aactacggattcaacagaagccatgctgtcgcatacagcatgatcggctatcagctcgcc
tatttaaaagcgcattatccgttatattttatgtgcgggctgttgacgagcgtcatcggc
aatgaggacaaaatatcgcaatatctgcatgaagcgaaggggagcgggattcaagtcctt
ccgccgtcaataaacaaaagcggttttccgtttgcgccggaaaacggagccgtcagatac
agtttgcgggccgttaaaaacgtaggcgtctcggcagtgaaagatatttataaagcaaga
acacataaaccgttcgaggatcttttcgatttctgctttcgcgtacccgcaaaaagcgtg
aatcggaaaaccatcgaagcccttatattttctggcgccatggacgaattcaatcaaaat
cgcgccgccttgctggcctccgttgatgtggctttagagcacgctgaactttttcgtgca
gacgatgaccaaatgggattgtttttggaagaatcgttctccattaagccaaaatatgta
gaggctgaggaatttccgctcgtggacaagcttcggttcgaaaaagaagctctcggtgtt
tatttctcaagccatcctttgtctgctttcagggatctcctgaaaaaacggggggcgcaa
gcgatcacagcagcgcggcagatgccgaagggtcagctgtcaatcggcgctttgctcgcg
ggcattaaaacgattcggacaaagacaggtcagcatatggcgtttctcacattaagcgat
gaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctgtctccgctg
ttagaagaaggcgcgcttttattcgccgccggaaaaatggaagagcgtcaggagaagaca
caattcatcatgtcatccgcctctcttcttgagcagacggaggcagacagagcgccgtct
gtttacatcaaaatcgaaggcagccggcacaatcaggagtttttggaaaagatgaagcgt
attttactggagcataaaggggaaaccggcgtttatctttattatgaaaaagacaagcag
acgatcaggctgccggatacttttcatattcaggcggaccatcaggcgttataccgttta
aaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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