Bacillus velezensis FZB42: RBAM_027060
Help
Entry
RBAM_027060 CDS
T00582
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bay
Bacillus velezensis FZB42
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bay03016
]
RBAM_027060 (thpR)
Enzymes [BR:
bay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RBAM_027060 (thpR)
Transfer RNA biogenesis [BR:
bay03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RBAM_027060 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABS75064
UniProt:
A7Z7T8
LinkDB
All DBs
Position
complement(2830836..2831387)
Genome browser
AA seq
183 aa
AA seq
DB search
MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWVHPHDYHITLIFLGAADEERLAK
LSSLLADAASAAQPFTVQFQHLDIFGDRRQPRVLHLEPERNELLFDLREKTKQAVLKAGF
QVEKRPYHPHMTMARKWAGDRPFPDDVPFESGRVQSAVSRFSLFQTHLDRSPKYEEIAQF
QLT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttcattgccgcattattttatcggcattccgattccggctgacattgctgaa
ccgatttgggaagcagccaaaaaggagccggcgttatcattcaaaaaatgggtgcacccg
catgactatcatattacactcatttttctcggagccgcggatgaagaacggcttgcgaaa
ttatcgtctctgctcgcagatgctgcgtcggcagcgcagccgtttaccgtacagtttcag
catctggatattttcggcgaccgcagacagccgagagtgcttcaccttgagcccgaacgg
aatgaactgctctttgatttgcgggaaaaaacaaaacaggctgttttgaaggccggtttt
caagtggaaaaacgcccgtatcaccctcatatgacgatggcgcggaagtgggcgggagac
cggccgtttcctgacgatgtgccgtttgaaagcggcagggtgcaaagtgccgtcagccgg
ttttccttgtttcagacccatcttgaccggtcgccaaaatacgaagaaatcgcacagttt
caattgacataa
DBGET
integrated database retrieval system
