Bacillus velezensis FZB42: RBAM_031510
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Entry
RBAM_031510 CDS
T00582
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bay
Bacillus velezensis FZB42
Pathway
bay02020
Two-component system
bay02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBAM_031510 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBAM_031510 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bay03021
]
RBAM_031510 (rpoN)
Transcription machinery [BR:
bay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBAM_031510 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_32
MarR_2
HTH_IclR
Sigma70_r4
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ABS75482
UniProt:
A7Z906
LinkDB
All DBs
Position
complement(3269997..3271310)
Genome browser
AA seq
437 aa
AA seq
DB search
MMDIKLQQTQMLKPQLTQELKQAITLLGYNSAELAGYIDELSLENPLIERKETDTPPLSY
HKTNKNRMKERDGSQQIRLTRKTLQDSLKQQALDMKLSDDEKKIFNYLIHSLDSNGYLKE
DIPAAADHVSASQEETEAVLKKLQSLEPAGIGARSLQECILLQLRRLPERNEQAEWIADA
YFELFARKNWKALTLKTGIPLKDIQDIADMISALDPRPGLRYAHEEPGFYVEPDIFITVK
NGIIQARLNSRSFPDIQLHTHYQPLLSAAGCRDTKNYLSAKYQEWRWLNRALSQRKQTIT
RIIGVLTERQESFFLTGKSGMQPLTLREVAETLELHESTISRAIKGKYVQTPYGLYEMKT
FFSAKAESSGDGGASNYAVKAHLEALVGKEDKKKPFSDQKLADLLDEQYDIRISRRTVAK
YRDQLNIPPSSARKRYS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatcaaacttcagcaaacacaaatgttaaagcctcaattaacgcaagagctt
aaacaggctatcacattactcggatacaattccgcggaactggccggatatattgatgag
ctctcactggaaaaccctctgattgaacgaaaggaaacagacacgccgccactatcttac
cataaaacaaataaaaacaggatgaaagaacgggacggaagccagcagatcagacttacc
cgcaaaacgctgcaggattcgctcaaacaacaagccttagatatgaaactgtccgatgat
gagaaaaaaattttcaattatctgatacattcattggactcaaacggatatttaaaagag
gacataccagctgccgccgaccatgtatccgcttcacaagaggagacggaagctgttctg
aaaaagcttcaatctcttgagcccgcgggaatcggcgcccggtctttgcaggaatgcatc
cttcttcagctccgccgtcttcccgagcggaacgaacaggcggaatggattgccgacgcc
tattttgagctatttgcaagaaagaactggaaagcgcttacactgaaaacgggcattccg
cttaaagacattcaggacatcgctgacatgatcagcgcgcttgatccgaggccggggctc
cgttatgcgcatgaggagccgggtttttacgtggaaccggatatattcatcacagtgaaa
aacggcatcattcaagcgcggctcaacagccgttcgtttcctgatatccagcttcatacc
cattatcagccgctgctgtcagctgccgggtgccgtgacacgaaaaattatctgtcggca
aaatatcaggaatggcgctggctgaaccgggctttgtcgcaaagaaaacaaacgatcacg
agaattatcggcgtcctgactgaacggcaggaatccttttttctcacaggaaaaagcgga
atgcagccgctgaccttaagagaggtggcggaaacgctggagctccacgaatcaacgatc
agccgggccatcaaagggaagtacgttcagacgccgtacggactgtatgaaatgaaaaca
tttttctcggcgaaagctgaatcgtcgggggacggcggcgcctccaattatgccgtaaaa
gcgcatctggaggcattggtcggtaaagaagataaaaagaaacctttttcagaccaaaag
cttgccgatctgctggatgaacaatatgacatccgaatctcaaggcgcaccgtcgccaaa
taccgtgaccaattaaatattccgccgtcatcggcgagaaaacggtacagctga
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