Bacillus velezensis FZB42: RBAM_037950
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Entry
RBAM_037950 CDS
T00582
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBAM_037950 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_037950 (xth)
Enzymes [BR:
bay01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RBAM_037950 (xth)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBAM_037950 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABS76120
UniProt:
A7ZAU4
LinkDB
All DBs
Position
complement(3899639..3900397)
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AA seq
252 aa
AA seq
DB search
MKLISWNVNGLRAVMKKIDINTYVQETAADILCLQETKVQDGQVSLQPEGYHAYWNYAVK
KGYSGTAVFSKEKPLHVLYGLGIDDHDQEGRVITLEFEHVFVVNCYTPNAKRGLERIDYR
LQWEADFKDYLQKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQEREAFSALLN
AGFTDSFRYLYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAAICADIMG
SDHCPVEMTVDL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatttcttggaatgtaaacggcttgcgtgccgtgatgaaaaaaatagatatc
aatacttacgttcaggaaacggcagcggatattctatgtctgcaagaaacaaaagtacag
gacggacaagtatcattacagcctgaaggatatcacgcctattggaactatgcggtgaaa
aaaggctactcaggcacggctgttttttcgaaagaaaagccgctgcacgtgctctatgga
ctggggattgacgaccatgatcaagaaggacgggtgatcacgcttgaatttgagcatgtg
tttgtcgtcaactgttatacgccgaatgccaaacgcggattagagcgaattgattaccgt
cttcaatgggaagccgattttaaggattatctgcagaagcttgaccggaaaaagcccgtg
atcttatgcggcgatctgaatgtcgcacacagggagatagacttaaaaaatccgaaagcc
aaccggaagaacgccggtttctcggagcaggagcgggaagcgttcagcgccctgctgaac
gcgggatttaccgactcattccgctatttatatcctgaccaggaaggcgcctattcctgg
tggtcttacaggacgaacgcacgtgagaaaaacatcggttggcggcttgattacgtcatt
gtttcagacagactgaagcagcggatcagccaagcggccatttgtgccgatatcatgggt
tctgaccattgccctgttgaaatgacagtggatttatga
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