Bacillus velezensis FZB42: RBAM_38785
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Entry
RBAM_38785 CDS
T00582
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bay
Bacillus velezensis FZB42
Pathway
bay03410
Base excision repair
bay03430
Mismatch repair
bay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBAM_38785 (recJ)
03430 Mismatch repair
RBAM_38785 (recJ)
03440 Homologous recombination
RBAM_38785 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bay03400
]
RBAM_38785 (recJ)
DNA repair and recombination proteins [BR:
bay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RBAM_38785 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RBAM_38785 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RBAM_38785 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ABS74833
UniProt:
A7Z757
LinkDB
All DBs
Position
complement(2594097..2596457)
Genome browser
AA seq
786 aa
AA seq
DB search
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVQEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCGYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVAELRDRLNQMAEETLTEEDFIPVQEVYLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVKNAVLEDVRLIGANKNHVKMTVKSDSAVLDCVGFNKGELEAGVVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRTWEDTVTALPKEKRVLISFNEKTAHQ
LREKELSGELAEITSESEAEALQLDGKYAVFLDVPPSADRLQHLLDGKKPERIYFVFINH
EEHFLSSFPSRNDFKWFYAFLLKRGAFDFGKHGSELARHRGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaagtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcactgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaaactggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcagtgatg
ctgacggcactcagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccaagaagctgaagtcgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgatcatccacccgaagcagccgggctgcggctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcaatcggtacggttgcagatctggtgcctcttcatgacgaaaacagattaatt
gcgtcactcggaatcgaaaggcttcggacgacaaatcggccgggcctcaaagccctgatt
aagctttccggcggagatatcggacaagctgatgaggaaacgatcggatttcaggtcgcg
ccaaggctcaatgccgtcggaagaatagaacaggccgatcccgccgtccatctgctgatg
accgaagatcagtttgaagcggaggaactggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaatccgggagtcgtcggtatt
gtcgcatcgaagctggctgaacgtttttaccggcccgctgttgtgcttgggatagatgag
gagcagggaatcgctaaagggtcggcgcgaagcatcagaggcttcaacctgtttacgagc
ctttcacagtgcagagacattcttcctcatttcggcgggcatccgatggcggcaggaatg
acgttgaaggctgaagatgtggcggaattaagggacaggctgaatcaaatggctgaagaa
acccttacggaagaggattttattcccgttcaggaggtgtatcttgtctgcggcgttgaa
gacataaccgttgaaagcattacagaattgaatatgctgtcgccgttcggcatgcttaac
cctaaaccgcatgtgatggtgaaaaatgctgtgcttgaagatgtgcgcctgatcggagcg
aataaaaatcacgtgaaaatgacggtgaaaagtgattccgccgtccttgactgcgtcggc
tttaacaaaggagagcttgaagccggagttgtccccggatcaacgatttccattgtcggc
gagatgtccattaatgaatggaacaacagaaagaaaccccagctgatgattaaagatgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggacgtgggaagacacggtc
accgcgctgccgaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgctcatcag
ctccgtgaaaaagagctgtcgggcgagcttgccgagatcacttcggaatccgaggcagaa
gctctccagcttgacggaaaatatgccgtttttctggatgtgccgccgtcagcggatcgt
ctgcagcatttgcttgacggaaagaagccggaacggatttattttgtttttatcaatcat
gaagaacatttcctgtcctcatttccatcgcggaatgatttcaagtggttttacgcattt
ctcttgaaaaggggcgcttttgacttcggcaagcatggttcagagcttgcgagacacaga
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctggcagat
tcgcaaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcagcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaagcttat
gaaagtacgaggaggacatag
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integrated database retrieval system
