Brevibacillus aydinogluensis: BSPP4475_04650
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Entry
BSPP4475_04650 CDS
T09295
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bayd
Brevibacillus aydinogluensis
Pathway
bayd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bayd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSPP4475_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bayd03019
]
BSPP4475_04650
03009 Ribosome biogenesis [BR:
bayd03009
]
BSPP4475_04650
Enzymes [BR:
bayd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSPP4475_04650
Messenger RNA biogenesis [BR:
bayd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSPP4475_04650
Ribosome biogenesis [BR:
bayd03009
]
Prokaryotic type
rRNA helicases
BSPP4475_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HeLo
AAA_19
CARD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAJ1001615
UniProt:
A0AA48RGG6
LinkDB
All DBs
Position
4475:967346..968746
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AA seq
466 aa
AA seq
DB search
MAKSFAMFGFRPELMQGIHDLFYKEPTPIQAEAIPLILEGKDVIGQAQTGTGKTAAFVLP
ILERLQPGKRDIQALILTPTRELSIQIAEEVEKLGKYLNVNVLSLHGGTDIERQLSKLKH
VVHIVVGTPGRVLDHMRRGSLHFGRISTLVLDEADKMMEMGFLEEVHEIIEGTPQHRQTL
LFSATMPDSVKKLAQYYMKQPPHIRIEAKQKTVESIEQIYYVVNQSDKMDALVDLLENEN
PYLCIIFANTQARVQQLTARLQENGFSAEALYGDLSQNKREQLMKQFRDIKFQYLVATDI
AARGLDVEGVTHVVNYDVPNDVESYIHRVGRTGRAGQKGIAISLVSPRQKSIMTRFAKAT
KAPIEEKLLVVGRHLDAGRRKRAEEREAYFAQLREQKAKEQLKEKEKQYAPIREALKKKI
KVKPGYKKKLARELESLKTLYEKNRRRQEAMAARKAAKGKKPRGRG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgtttgcgatgtttggctttcgaccggagttgatgcagggcattcacgac
ctgttttataaagagccgacgccgattcaggcggaggcgatcccgctaattctcgaaggg
aaggacgtgatcggccaggcgcaaacggggacgggcaagaccgccgcgtttgtgctgccg
atcctggagcggctgcagccgggcaaacgggacattcaggcgctgatcctgacgcccacc
cgtgagctgtcgatccagatcgccgaagaagtggagaagctgggcaaatacctgaacgtc
aacgtactctctttgcacggcgggacggatattgaacggcagttgagcaagctcaagcat
gttgtccacatcgtcgtcggcaccccgggaagggtgctggaccacatgaggcggggctcg
cttcacttcggccgcatttccacgctggtgttggacgaggctgacaagatgatggagatg
ggctttcttgaggaggtccatgaaattatcgaggggacgccgcagcaccggcaaacgctg
ctgttctccgccaccatgccggattcggtgaaaaagctggctcagtactacatgaagcag
ccgccccacatccgaatcgaggcaaagcagaagacggtggagagcattgaacaaatctac
tacgtggtcaatcagagcgacaagatggatgcgctggtggacctgttggaaaatgagaat
ccgtatctctgcatcatctttgccaacacccaggcgcgcgtccagcagttgacggcccgc
ctgcaggaaaacggcttttcggcggaagcgctgtacggcgatctgtcgcaaaacaagcgg
gaacagctgatgaagcagttccgcgacatcaagtttcagtacctggtggcaaccgacatc
gctgcccgcggtctggacgtcgaaggggtgacacacgtcgtcaactacgatgtccccaat
gacgtggaaagctacatccaccgcgtcggccgcaccggacgggcggggcagaagggaatc
gccatctctcttgtctctccccgccaaaaaagcatcatgacccgcttcgccaaggcgacc
aaggcgccgattgaggaaaaactgctggtggtaggccgccatctggacgccggccgccgc
aagcgggcagaggagcgggaagcgtactttgcccaactgcgcgagcaaaaggccaaagaa
cagttgaaggaaaaggaaaagcagtacgcccccatccgcgaggcgctgaaaaagaagatc
aaggtgaagccgggctacaagaaaaagctggcacgggaactggaatcactcaagaccttg
tacgagaaaaaccgccgtcgccaagaggcaatggcggcccgcaaagcggcaaagggcaaa
aaaccgcgcggcaggggctaa
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