Brevibacillus aydinogluensis: BSPP4475_07505
Help
Entry
BSPP4475_07505 CDS
T09295
Name
(GenBank) DNA ligase (ATP)
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
bayd
Brevibacillus aydinogluensis
Pathway
bayd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bayd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BSPP4475_07505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bayd03400
]
BSPP4475_07505
Enzymes [BR:
bayd01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BSPP4475_07505
DNA repair and recombination proteins [BR:
bayd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BSPP4475_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
CAJ1002154
UniProt:
A0AA48MAS2
LinkDB
All DBs
Position
4475:complement(1514239..1515189)
Genome browser
AA seq
316 aa
AA seq
DB search
MKPIIPMEPVASDTIPQEPGWIAQVKWDGVRILTYYDGKHVQLFNRKGNERTHHYPELAD
IETYCRADSVILDGEVIALGSDGKPSFHEVMRRDGIRRMQNVPRMQQTVPVTYMIFDCLY
LNGEWINQRSLQDRLKLLSETIEPNSHVQVVSSHDNGSALFEVIRQHGMEGIVMKRLDAP
YLIGAKKAVWLKIKHYRDVIAAIGGFTLNGGVVNAVLLGLYDEQGRFWYIGHAGTGKLSR
QEWRELTDRLMPAVIREKPFVNRPDRHHGVFWVTPTLTAKIKYAEWTEGRSLRQPSIQAI
VDVPPHACRLDREMMR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatcatcccgatggagccagtggcgagcgacaccatcccccaggagccgggc
tggattgcccaggtgaaatgggacggcgttcgcatccttacctattatgacggcaaacac
gtgcagctgttcaatcgaaagggaaacgagcgcacccatcactaccctgaactagcagat
attgaaacgtactgccgagccgactccgtgatcctggatggtgaagtgatcgcgctgggg
agcgacggcaaaccgtcctttcatgaagtgatgcgccgggacgggattcgccgcatgcag
aacgtgccccggatgcagcagactgtgccggttacctacatgatttttgactgtctgtac
ctaaacggggaatggatcaaccaacgctccttgcaggacaggctcaaactgctgtccgaa
acgatcgaaccgaacagccacgtgcaagtggtgtcgtcccatgataacggttccgccctg
tttgaggtgatccggcagcacggcatggaaggcatcgtcatgaagcggctggatgccccc
tatctcatcggtgcgaaaaaagccgtgtggctgaagatcaaacactaccgggatgtgata
gccgccattggcggtttcaccttgaacggcggagtcgtcaacgcggtgctgttgggcctc
tacgatgagcagggccggttttggtacatcggtcatgcgggaacgggcaaactgtcccgc
caggagtggcgggagctgaccgacaggctgatgcctgcagttatccgggaaaaacccttc
gtaaacaggcccgatcgtcaccatggcgtattctgggtgacccccacgctgacggccaaa
atcaagtacgcggaatggacagaagggcgatcacttcgccagccatccattcaggcgatc
gtggacgtaccgccgcacgcctgcaggctggacagggagatgatgagatga
DBGET
integrated database retrieval system
