Brevibacillus aydinogluensis: BSPP4475_17760
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Entry
BSPP4475_17760 CDS
T09295
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bayd
Brevibacillus aydinogluensis
Brite
KEGG Orthology (KO) [BR:
bayd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bayd03009
]
BSPP4475_17760 (rlmD)
Enzymes [BR:
bayd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BSPP4475_17760 (rlmD)
Ribosome biogenesis [BR:
bayd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BSPP4475_17760 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
MTS
Methyltransf_11
PrmA
N6_N4_Mtase
NADH-G_4Fe-4S_3
Methyltransf_12
TPMT
Motif
Other DBs
NCBI-ProteinID:
CAJ1004161
UniProt:
A0AA48MA91
LinkDB
All DBs
Position
4475:complement(3570789..3572213)
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AA seq
474 aa
AA seq
DB search
MAKTAKKRRGTAVKPELDLPVRLGQTVEVEITGLNHEGAGVGRVDGYTLFVQGALAGERV
RARIEHVKKSYGFASLLDVIEASPHRAQPPCPVYDRCGGCSLQHLAYEEQIRHKQQIVKD
NLRRIGGFPVDGEGAVVVHPTIGMSDPWRYRNKAQVPIGEQNGALVGGFYAERSHEIVDM
DECLIQHPANDEAVAAVKRIAARLGIQPYDEVRHTGLLRHVVAKVGARTGEVMVVLVTTE
EFIPQREMLIESIRAQVPGVTSIVQNINPDKTNVIFGKTSITLWGSDVIYDYIGPIKFAI
SARSFYQVNPVQTEVLYNKTLEYVGATGTETVIDAYCGIGTISLFLAQKSRHVYGVEIVP
EAIADAKRNAELNGIANVTFETGPAEVVIPAWKDQGIRPDVIVVDPPRKGCDEALLTTIL
QMKPQRVVYVSCNPSTLARDLKVLAELYELKEVQPVDMFPHTGHVESVALLTLK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagacagcaaagaagcgacgcggaacggcggtcaagccggagcttgacctgccg
gtccgcctcggacaaaccgtagaagtggagataaccggactcaatcacgaaggtgcaggc
gtcggccgggtggacggctacaccctgttcgtgcagggagcgctggccggagagcgggtg
cgtgcacggatagagcacgtgaaaaaaagctacggctttgcctcgctgctggacgtgatc
gaagccagtccgcaccgcgcccagccgccctgtccggtgtatgaccgttgcggtggctgt
tcgctgcagcacctcgcctatgaggagcagatccggcacaagcagcagatcgtcaaagac
aacctgcgccggattggcggctttcccgtggacggggaaggagcggtcgtcgtccatccg
acgatcgggatgagcgatccgtggcgctaccgcaacaaagcccaggtgccgatcggcgag
cagaatggggcgctggtgggcggcttttacgccgagcgctcccacgagattgtcgacatg
gacgaatgcctgatccagcacccggccaacgacgaagcggtcgccgccgtcaagcggatc
gccgcccggctgggcatccagccgtatgatgaagtgcgccataccggcctcctgcgccat
gtggtggccaaggtgggggcgcgtacaggcgaagtgatggtggtgctggtgacgacagag
gaattcatcccgcagcgagagatgctgatcgagtccatccgcgcccaggtgccgggtgtg
accagcatcgtgcaaaacatcaacccggacaagaccaatgtcattttcggcaaaacgtcg
attacgctttggggcagcgacgtgatctacgactacattggcccgatcaaatttgccatc
tctgcccgctcgttctaccaggtgaatccggtgcagacggaagtgctgtacaacaaaaca
ctggagtacgtcggcgccaccgggacagaaacggtgatcgacgcctattgcggcatcggg
acaatttcgctctttctggcgcaaaaatcccgtcacgtctacggcgtggagatcgtgccg
gaagcgatcgccgacgccaagcgcaatgccgaactgaacggcatcgccaacgtcaccttt
gaaaccggcccggccgaggtggtcatccctgcgtggaaagaccagggcatccgccccgac
gtgatcgtcgtcgacccgccgcgcaaaggctgcgacgaggcgctgttgacaaccattttg
cagatgaaaccgcagcgggtggtgtacgtctcctgcaacccgtcgacgctggcccgggat
ttgaaggtgctggcggagctgtacgagctgaaggaagtgcagccggtggatatgttcccg
catacggggcatgtggagagtgtggcgctgctgaccctgaaatag
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