Bacillus amyloliquefaciens TA208: BAMTA208_02300
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Entry
BAMTA208_02300 CDS
T01824
Symbol
ydcI
Name
(GenBank) RNA binding protein containing S1 RNA binding domain,YdcI
KO
K06959
protein Tex
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
BAMTA208_02300 (ydcI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
S1
HHH_9
YqgF
HHH_7
S1_RRP5
T2SSK
Carb_kinase
Motif
Other DBs
NCBI-ProteinID:
AEB22647
LinkDB
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Position
463414..465573
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AA seq
719 aa
AA seq
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METLALLKKQIAEETALSQKNVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQAISER
WQYIQNLTQRKEEVIRLIAEQDKLTDGLKQKIEQAAKLQEVEDLYRPFKQKRKTKATVAK
SKGLEPLADYILSLPKENRLHEIADQYISEEKEVATREEAIEGAKHIIAEQISDDPHFRK
WIRQETYKKGILTSTAGKSAADDEKNVYEMYYEYEEPIQKVVPHRVLAMNRGEKEGILKI
AIEPPADQLKAYLEKQIIKHRETPVKETLKEAIEDGYKRLIQPAIERDIRKELSEKADAQ
AIHIFAENLRKLLLQPPMKGKVVLGVDPAFRTGCKLAVVDETGKVLKIDVIYPHAPVKKT
AEAQKKIKQLLNRYEVEVVAIGNGTASRETEQFIVDVLKETERDIYYVIVNEAGASVYSA
SEIAREEFPDFQVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKHLNESLRF
VVETVVNQVGVNVNTASAALLQYVAGLSKTVAGNIVKKREELGKFTNRKELKEIPRLGAK
TYEQCIGFLRVPEGQEPLDRTGIHPESYKETKALLKKLHLTADQIGSADVKEKISALPLS
ETAEELGIGDITLADICGQLTRPERDPRDEVPKPLLKKDVLQLEDLKEGMELQGTVRNVV
DFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVEGVDVQKGRVSLSMVK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgttagcccttttgaaaaaacaaattgctgaagaaacagctttatcccaaaaa
aatgtcgaaagtgtcatccgcctgcttgaagacggcaataccgttccgtttattgcgcgg
taccgaaaagaacagacaggctcaatggacgaggtgcagattcaggcaatctccgagcgg
tggcaatacatacaaaacctgacgcagcggaaagaagaagtcatcagattgatcgccgaa
caggacaagctgacggacggactgaaacaaaaaatcgaacaagcggccaaacttcaggaa
gtcgaggatttataccgtcccttcaaacaaaaacggaaaacaaaagcgaccgtcgccaaa
agcaaagggcttgagccgcttgcggactatattctttctctcccgaaagaaaaccggctc
catgaaatcgctgatcaatatatcagtgaagagaaagaagtcgctacaagagaagaagcc
attgaaggcgcgaagcacatcatagccgaacaaatctcggatgatcctcattttagaaag
tggatccgccaggaaacgtataaaaaaggaattctcacatccacggcaggcaagtcagcc
gcagatgacgagaaaaacgtctatgaaatgtattatgaatacgaagagccgatccaaaaa
gtcgttcctcacagagtgcttgcgatgaaccgcggtgaaaaagaaggcattttaaagatt
gcgatcgaaccgcccgccgatcagttgaaagcttatttagaaaagcaaatcatcaaacat
cgtgaaacgcctgtgaaagaaacgctgaaagaagccattgaggacgggtacaaacgcctg
atccagccggctattgagcgtgacatccgcaaagagctgtcagaaaaagcagacgcgcag
gcgatccatattttcgctgaaaacctgcgtaagctcctgctgcagccgccgatgaagggg
aaagtcgtgctcggcgtcgatccggctttccgtacgggatgcaaactggcagtcgttgac
gagacgggaaaagtgctgaaaatcgacgttatttatccgcacgctcccgtcaaaaagaca
gccgaagcccagaaaaaaatcaaacaattgctgaaccgttacgaagtcgaggtcgtggcg
atcggaaacggcacggcatcaagagagacagagcaattcatcgttgatgtgttaaaagaa
acagagcgggacatctattatgttatcgtcaatgaggcaggggcaagcgtgtactctgcg
tcagaaatcgcccgtgaggaatttccggattttcaggtcgaagagcggagcgccgtctcc
atcgcgcggagattgcaggacccgctggccgaacttgtgaaaattgatcctaaatccgtc
ggcgtcgggcaataccagcatgatgtcagccaaaagcacttaaacgaatctctccgtttt
gtcgtagagaccgtcgtcaaccaagtcggggtaaatgtcaatacagcatcagcagcgctg
cttcaatatgtagccgggttatccaaaaccgttgccggcaacatcgtcaaaaaaagggaa
gaactcggcaaattcacaaatcgcaaagagctgaaagaaatcccgcgcctcggtgcaaaa
acatatgaacaatgcatcggctttttgagagtgcccgaaggacaggaaccgctcgaccgc
accgggatacacccggaaagctataaagagacaaaggcgctgctcaaaaaacttcatctc
acagcagatcagatcggaagcgcagacgtaaaagagaaaatcagcgcacttccgctgtct
gaaacggcagaagagctaggaataggggacattacgcttgcggatatttgcgggcagctg
acaaggccggagcgcgatcctcgtgacgaagtgccgaaacctttgctgaaaaaagacgtt
ctgcagcttgaggatttaaaggaaggaatggaattgcagggcaccgtccgcaacgtcgta
gacttcggcgctttcgtcgatatcggcgtcaagcaagacgggcttgtgcacatctcaaaa
ctgagcaatcaattcgtcaaacatcctcttgacgtcgtatcggtcggagacatcgtcacc
gtatgggtcgaaggggtggacgtgcaaaaaggcagagtgtcgctgtctatggtaaaataa
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