Bacillus amyloliquefaciens TA208: BAMTA208_04660
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Entry
BAMTA208_04660 CDS
T01824
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baz03019
]
BAMTA208_04660 (yhaM)
Messenger RNA biogenesis [BR:
baz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAMTA208_04660 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AEB23113
LinkDB
All DBs
Position
951146..952090
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AA seq
314 aa
AA seq
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MAKGIMLHEVGEQVDQYFLIKSSTKGIASNGKPFLTLMLQDQSGDIEAKLWDAKPTDEVT
YAAQTIVKVIGDVHHYRGRNQLKLRNIRPAAENENVSIDDFLETAPIPKDEMMETVTQYI
FEMKNPNIQRITRHLIKKYAADFMDYPAAAKNHHEFVSGLAYHVVSMLNLAKAIADLYPS
LDRDLLYAGVILHDLGKVKELSGPVSTTYTVEGNLLGHISIMVTELSKAAEELQIAAEEV
LILKHLILSHHGKAEWGSPKPPMVKEAEILHYIDNLDAKMIMMDRALERVKPGEYTERVF
ALENRSFYKPTFHQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtattatgctgcacgaggtcggcgagcaggtcgatcaatactttctgatt
aaatcttcgactaaaggaatcgctagcaacggaaaaccgtttctgacattaatgctgcag
gaccaatccggggatatcgaagcgaagctgtgggatgccaagccgactgatgaagtcacg
tacgcggcgcagacgatcgtgaaggtaatcggagatgtccatcattatcgcggtcgaaac
cagcttaaactgagaaatatccggccggccgccgagaatgaaaatgtcagcattgatgat
tttctggaaacggcgccgattccaaaagatgaaatgatggagaccgtcacgcaatatatt
tttgaaatgaaaaatccaaacatccagcggatcacaagacatttgatcaaaaaatatgcc
gctgattttatggattacccggcggcggctaaaaaccaccatgagttcgtctcagggctc
gcgtatcacgtcgtgtccatgctgaacttggcaaaagcgattgccgatctgtatccgtca
cttgaccgggatttgctgtatgcgggagtcattttgcatgatctcggcaaagtaaaagag
ctttcaggccctgtctccacgacgtacaccgtggaagggaatctgctcggacacatttca
atcatggtgacagagctttcaaaagcagccgaagagcttcagattgccgctgaagaagtg
ctgattctgaagcatttgattttaagccatcacggaaaagcggagtggggaagcccgaaa
ccgccgatggtgaaagaagcggaaattctgcactacattgacaatctggatgcaaaaatg
atcatgatggacagagcactggaacgggtgaaaccgggcgagtacacagagcgtgtattt
gcgcttgaaaaccgctctttctacaagccgactttccatcaataa
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