Bacillus amyloliquefaciens TA208: BAMTA208_04980
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Entry
BAMTA208_04980 CDS
T01824
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit A)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baz03400
]
BAMTA208_04980 (addA)
Enzymes [BR:
baz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAMTA208_04980 (addA)
DNA repair and recombination proteins [BR:
baz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BAMTA208_04980 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB23177
LinkDB
All DBs
Position
1014131..1017835
Genome browser
AA seq
1234 aa
AA seq
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MQIPKPKDSIWTDDQWSAIVSSGRDILVAAAAGSGKTAVLVERMIRKITAEEEPVDVDRL
LVVTFTNASAAEMKHRIAEALEKELAKNPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYMIDLDPGFRMADQTEGELLGDEVLDELFEDEYAKGNQAFFELVDRYTTDRHDLDLQDL
VKRVYEYSRSHPDPEAWLKSFVRLYDVTEESKMEELPFYEYVREDAEMALFGAKQKLEKA
LELTKAPGGPAPRADNVLDDLQQIEELISCRHDFKALYERVPAVTFKRAKAVKGDEFDKA
LLDEATDLRNGAKKLIEKLKTDYFTRSPQDHLKSLKDMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLAILTARDEEGRRVPSEAAVYYQDQFHEVLVDEYQDTNLVQESIL
QLVKSGNEEAGNLFMVGDVKQSIYRFRLAEPLLFLGKYKRFTEDGEGAGQKIDLNQNFRS
RSDILDSTNFLFKQLMGGKIGEVDYDEQAALKLGASYPPNDAAKTELLLIDSADDADSPE
DAEDFETVHWEAKAIAAEIRKLVSSPFKVYDGKTKTHRNIQYRDIVILLRSMPWAPQLME
ELKNQGIPVYANLTSGYFEAVEVAAALSVLKVIDNPYQDIPLASVLRSPIVGCDENELAL
IRLEKKKAPFYEALKAYIANGDRHDDLYQKLRTFYDSLQKWRSFSTNHSVSELIWEVYRD
TGYFDYAGGMPGGKQRQANLRVLYDRARSYEATAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFTAGLGRSFNMMDLNKSYLLDKELGFGTKYIHPELR
ISYPTLPLVAMKKKMRRELLSEELRVLYVALTRAKEKLFLVGSCKNREKQLAKWQAQADR
ADWLLSEFDRYQASSYLDFIGPALIRHSDMEAHRAPGLLAPEDIAHDPARFHIRMLQQSE
LLEDSPEERAEEKSKRLKAIQHGEPIPDSFSFDDQARRLLEWEYPYRKLTAIRTKQSVSE
LKRKQEYEDEYSGRSLIKPSGDTLLYKRPGFMMKKGLTAAEKGTAMHTVMQHIPLTHVPT
AEEAERTVRMLYEKELLTEEQQDAIDIDEVIQFFGTEIGKDLVGALRIDREVPFSMALPA
SEVYKDAETAGEPLLVQGIIDCLYETADGLYLLDYKTDRIEGKFRNGFEGAAPILQKRYE
TQIELYTKAVEQITKTNVKRRALYFFDGGHVLTL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcctaaaccgaaagacagcatatggacggatgaccaatggagcgccatcgtt
tcttccggccgcgatattctggtcgctgccgcagccggatcaggtaaaacggccgtgctt
gtagagcggatgatcagaaagataaccgcggaagaagagccggttgatgttgacaggctc
cttgtggtgacatttacaaacgcctcagcagcggaaatgaagcatcggatcgctgaagca
ttagaaaaagaactcgccaaaaatccggggtctctgcatatcagacggcagctgtctcta
ttaaatcgggcgagcatttcgacgcttcactctttctgtctgcaggtgcttaaaaaatat
tattatatgattgatcttgacccgggttttcggatggctgaccagacggaaggcgaattg
ctcggagacgaagtgcttgatgagctgtttgaggatgaatacgcaaaagggaatcaggcg
ttttttgagcttgtggacagatatacgacggacaggcatgatctggatcttcaagacctc
gtcaagcgggtgtatgagtattcccggtcgcatcctgacccggaagcgtggctgaaaagc
tttgtccgcctatatgatgtgacagaagaaagcaaaatggaagagctgccgttttacgag
tatgtgagagaagatgctgaaatggcgctcttcggggctaaacaaaagctagagaaggcg
cttgaactgacaaaagcgcccggcgggccggcgccgcgtgctgataatgttctggatgac
cttcagcagatagaagagctgatcagctgccggcatgactttaaggcgctgtatgaacgg
gttcctgcggtcacatttaaacgggccaaggcggtaaagggtgatgaatttgacaaggcg
cttttggacgaagcgactgatttgcgaaacggcgcgaagaaactgatcgaaaagttaaaa
accgattactttacaagaagcccgcaagatcatttaaagagtttaaaagacatgaagcct
gttattgaaaccctcgttcagctcgtaatatcatacggaaaacgatttgaagcggcgaaa
caggaaaaatcaatcattgatttctcagatttggaacattactgtctggcgattttaact
gcgagggatgaagaaggccggcgtgtgccgagtgaagcggccgtttattatcaagaccaa
ttccatgaagttctggttgatgaatatcaagataccaatcttgtgcaggaatccattttg
cagcttgtgaaaagcgggaatgaagaggcgggaaatctgtttatggtgggggacgtcaag
caatcaatctaccgtttcagacttgccgagccgctgctttttctcgggaaatacaaaagg
tttacggaagatggggaaggcgccgggcagaaaatcgacctgaaccaaaacttccgaagc
cgctccgatattttggacagtacgaatttcttgtttaagcagctgatgggcggcaaaatc
ggcgaagtggactacgatgaacaggcggcattaaagcttggcgcatcatatccgccgaat
gacgcggcgaaaacggaactgctgctgattgacagcgctgatgacgcagacagccccgag
gatgccgaagactttgaaaccgtgcattgggaagcgaaagcgatagccgcggagatccgg
aagcttgtctcatctccgtttaaggtatatgacggcaaaacaaaaacacaccggaatatc
cagtaccgggatatcgtgattttgctgcgctccatgccatgggctccgcaattaatggaa
gagctgaaaaaccagggcattccggtttacgccaatttgacgtcaggttactttgaagcc
gtggaggtggctgcggcgctttcagtcttaaaggtgattgataatccgtatcaggatatt
ccgcttgcttccgtgctgcgctcgcccatcgtcggctgtgacgaaaatgaactcgcgctc
atacgccttgaaaagaaaaaagcgccgttttatgaagcgctgaaagcgtatatagcgaac
ggtgacagacatgacgacctgtatcaaaaactgagaacattttatgacagtctgcagaag
tggcggtcattctcgacgaatcattcagtgtctgagctgatttgggaagtataccgcgac
accggatattttgattatgcaggcggcatgcctggcggaaagcagcgtcaggccaatctg
cgcgtcttgtatgaccgggcgcgttcgtatgaagcgacggcattccgcgggttattccgc
tttttgcggttcattgaacggatgcaggagcgcggcgatgatttggggacggcgcgggcg
ctcagcgagcaggaggatgtcgttcggctgatgacgatccacagcagcaaaggacttgaa
ttccccgtcgttttcaccgccggactcggcagaagttttaatatgatggatctcaacaaa
tcatacctgcttgataaagaactcggtttcggcacgaagtatattcatccggaacttaga
atcagctatccgactctgccgcttgtggcaatgaagaaaaaaatgcgcagagagctttta
tcagaagaattgcgcgtattgtatgtggcgctgacaagggcgaaggaaaagctgtttctc
gtcggttcctgcaaaaaccgggaaaaacagctggccaaatggcaggcgcaagcagaccgg
gctgattggctcctttctgaattcgaccgctatcaggcgtcatcttatttggactttatc
ggtccagcgctcatccgtcacagtgacatggaggcgcacagggcgccggggcttttggcg
ccggaggatatcgcgcacgacccggcgcgttttcacatcaggatgctgcagcaaagtgaa
ttgctggaagatagtcctgaagaacgtgctgaagaaaagagcaaacgtttaaaagcgata
cagcatggcgagccgattcctgattcgttttcatttgatgatcaggcgcgccgtcttctt
gaatgggaatatccgtatcggaagctgaccgccatcagaacgaagcagtctgtttctgag
ctgaagagaaagcaagaatacgaggatgagtacagcggacgctctctcatcaaaccgtca
ggggacactcttttatacaagcgtcccggctttatgatgaaaaaagggctgacagccgcc
gaaaaagggacggcgatgcatacggtgatgcagcacataccgctgacgcatgttccgact
gccgaagaagcggagcggacggtcaggatgctttacgaaaaagagctgctgacagaagaa
cagcaggacgcaattgatattgatgaagtgattcagtttttcggcactgaaatcggaaaa
gaccttgttggggcgctgcggattgatcgggaggtgccgttcagtatggcgcttccggcc
agcgaggtgtacaaggatgccgaaacggccggtgaaccgctgctcgtccagggaattatt
gactgcctctatgaaactgcggacggactctatttgctggactataaaacggatcgaatt
gaggggaaattccggaacggatttgaaggcgcggctccgatcctgcaaaaaaggtatgaa
acacaaatcgaattgtatacaaaagcggttgaacaaattacaaaaacgaatgtgaaaagg
cgtgcgctctatttcttcgatggaggtcacgttcttacactgtaa
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integrated database retrieval system
