Bacillus amyloliquefaciens TA208: BAMTA208_04990
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Entry
BAMTA208_04990 CDS
T01824
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baz03400
]
BAMTA208_04990 (sbcC)
DNA repair and recombination proteins [BR:
baz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BAMTA208_04990 (sbcC)
Archaeal homologous recombinant proteins
BAMTA208_04990 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
AAA_21
ABC_tran
RuvB_N
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AEB23179
LinkDB
All DBs
Position
1019071..1022463
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPILLTIKGLHSFREEQTIDFDGLSGAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDQLAVSFTFALQSGHRVSYKVERVFKRTDETKVKTALCRLIEIKEEQTV
LADKANEVNKKVEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRHMLQRLFNLEQYGD
RLVKKLRRRAQEAAAKKNEMLAEQSGLGDAGEDALKLAEQQFHEANERLEAAEKKRVQAK
ERFENHQEIWNLQTERNEYEVRQEKLEEKRPYITDLTDRLKEAETALALEPYADRYTEAV
RRKERAEKEHELAKRKLEAETASFTRQNEAYEAWRIHKAEQEPKLVKEEELYQRLSAIEQ
KLLEAKKEAEKTKAEHGKKEEEYEAASKQLTAVKDRLTRGQNRQNELKEELKVVQVTADE
RKKCQTAAQLAAGFQQTQEQIKKERVNLTAQLKNMEKLNGESEALSAKAKSEEEDITRAY
QTLQTVYHMVCETERSLKAAAERADKTQTDLRRRSEEARTAALTKELSEKLIEGKPCPVC
GSTQHDRSRSAHETYSPDTAVQERLQQVEALLSEAAALSQEVLTAKVALEEQSGRFTEEC
PFLQNARVPELEAASSISGRPLDEAFSAVRLEWKQMKQDMLSVKEKVTRLISTYQKTVKQ
AEQLGERIRYEEKEAERLKHSLEELESLSESRLNQYNEACGDIPLNRIDAWQASIDEKDR
QAEEFEKRIETSIAFLKEHEDEKERLQEKKHQLERERLELHYASERLQQVIDGYEQELGT
AAEETSISAKLDAVRQELQLLKSKEQSLFDALQQAQQSLNDAKGRESGSLMSLRDAESAL
EKAQNDWYGKSKDTGFAEPDQVKKSLLPKERAEEMKREIDEFLDSSKQLSANIRRVTDKL
AGRRVTEEEWTASVSLLEQAEAESGAAKEEKGAQAKAFAVMQKQHKRFKEIEAELKSWQT
QIDRLDKLQSVCKGNTFVEFLAEEQLESVARDASARLGALTRQRYAILVDSEGGFVMRDD
ANGGVKRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDQGLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPSEPGGKGTRVTMEIM
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattctgttaacgataaaagggctccacagcttcagagaggaacagaccatt
gactttgacggactgtccggtgccggggtgttcggaattttcggcccgacgggaagcgga
aagtcgtcgatccttgatgcgatgacactcgctttatacggaaaagtggagcgcgccgca
aataatacgcacggcattctgaaccatgccgaagatcagctcgccgtctcttttacattc
gcgcttcaatccggccacagggtgtcctacaaagtagagcgcgtttttaagagaacggat
gaaacgaaagtgaaaaccgccctttgccgcttgattgaaatcaaagaggaacaaaccgtg
cttgccgataaagcgaatgaagtgaacaaaaaggtggaagagcttcttggtctgaccatt
gacgactttacaagagccgtcgtgctcccgcaaggaaagtttgccgagtttctgtcactg
aaaggcgcggaaagaagacatatgctgcagcgcctttttaatctggaacagtacggtgac
aggcttgtcaaaaaattgcggcggcgggcgcaggaagcggccgcgaaaaaaaatgagatg
ctggcagaacaatccggcctcggagacgcgggggaagacgcgctgaagctggctgaacag
cagtttcatgaagcgaatgaacggcttgaagcggctgagaagaaacgggtccaagcaaaa
gaacgttttgagaatcaccaggagatttggaacttgcagacagagagaaacgaatacgag
gtgcggcaggaaaagcttgaggaaaaacgcccgtatatcacggatttgactgaccgtctt
aaagaagcggaaactgctctcgctcttgaaccgtatgcagatcgctacacggaagccgtc
cgccggaaggagcgcgccgagaaggagcacgaactggccaaacggaaattagaggcggaa
accgcttcatttacccggcaaaatgaagcctatgaagcgtggcggattcataaggctgaa
caagagccgaagcttgtcaaggaagaagagctgtatcaaaggctgtcagccattgaacaa
aagctgcttgaagcaaaaaaagaagcggaaaaaacaaaggcggagcacggcaaaaaagag
gaagaatacgaagccgcctcgaaacagctgaccgcagtgaaagatcgcctgacccgcggc
caaaacaggcagaatgagctgaaagaagagctgaaagtagttcaagtgaccgctgatgaa
cggaaaaaatgccagaccgccgcacagctggcagccggctttcagcagacacaggaacaa
atcaagaaagaacgggtcaatctgacagcccagttgaaaaacatggagaagctgaacgga
gaaagcgaggcgctcagcgcaaaggcgaaatcggaagaagaggacattacgcgcgcttat
caaacacttcaaaccgtttaccatatggtctgtgaaacggaacgttcactgaaagccgca
gccgaacgggcggacaaaacgcaaaccgacctgcgcaggcgctcagaggaagcgagaacg
gctgcattaacaaaagaattatcggaaaaactaatcgaaggaaagccttgtcctgtatgc
ggctcaacgcagcatgaccgttcgcgctccgctcatgaaacatattcgcccgatacggct
gtacaggaacgtttgcagcaggttgaagcgctgctttctgaggcggcggctctttctcag
gaagtgctgacggccaaggttgcattagaagagcagtcggggcgttttaccgaagaatgt
ccgtttctgcaaaacgcccgggtcccggagctggaagccgcttcttctatcagcggccgt
ccgcttgatgaagcgttcagcgccgtccgcctggagtggaaacaaatgaaacaggatatg
ctgtcggtaaaagagaaggtcacgagactgatcagtacctatcaaaagacggtgaaacaa
gctgaacagctgggcgaacgaatccgctatgaggaaaaagaagcagagcgcctcaaacat
tcattagaagagctcgaatcgctgtcagaaagccgcttgaatcagtacaatgaagcctgc
ggggatattccgttaaaccggattgacgcctggcaggcttcgatagacgaaaaggacagg
caggcagaggaattcgagaagcgcattgaaacaagcatcgccttcctaaaggaacatgaa
gatgagaaagaacggctgcaggagaagaagcatcagcttgaacgggaacggctcgagctt
cactatgcgtcagagcgcctgcagcaggtcattgacggatatgaacaagagctcggaaca
gcagctgaagaaacatccatttctgcaaagcttgacgcagtgcggcaggaattacagctc
ttaaaatcgaaagaacagtcgttattcgatgcgctgcagcaggctcagcaatcactgaat
gacgcaaaaggccgggaatccgggagcctcatgtcactgcgggacgctgagtccgccctt
gagaaagcgcaaaatgactggtacgggaaatcaaaagacaccgggtttgccgagccggat
caagtcaaaaaaagcctgcttccgaaagagcgggccgaggaaatgaaaagagaaattgat
gaatttctggacagctcaaagcagctttcggcaaatatccgccgtgtcactgataaatta
gccggccgccgggtaacggaagaagaatggacagcatcggtttctctgctggagcaggca
gaggctgagtcaggcgccgccaaggaggaaaaaggagctcaggcaaaagcctttgcggtg
atgcagaaacagcataagcgctttaaagagattgaagccgaactgaaaagctggcagaca
cagattgacaggcttgataagctccagtctgtatgtaaaggcaatacattcgtcgaattt
ttagcggaggaacagctggaaagcgtggcccgagacgcctctgcacggcttggagcgctg
acaagacagcggtatgccatattagtcgattcagaaggcggcttcgtcatgcgcgatgac
gcgaacggcggcgtcaaacgccccgtatcaagcctttccggcggtgagacgtttctgaca
tcgctgtcgcttgcgcttgccttgtctgcccagattcagctgcgggggcaatatccgctg
caattctttttcttagatgaaggattcgggacgcttgaccaagggcttttagacaccgtt
gtcacagcgctggaaaagctgcaatcggataatttgtccgtcggggtgatcagccatgtg
caggagctcagagcgcggctgccgaaaaaattaatcgttcatccgtccgaaccgggcgga
aaaggcacccgggtcacaatggagatcatgtag
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integrated database retrieval system
