Bacillus amyloliquefaciens TA208: BAMTA208_05445
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Entry
BAMTA208_05445 CDS
T01824
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
baz
Bacillus amyloliquefaciens TA208
Pathway
baz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAMTA208_05445 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baz03019
]
BAMTA208_05445 (recQ)
03400 DNA repair and recombination proteins [BR:
baz03400
]
BAMTA208_05445 (recQ)
Enzymes [BR:
baz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAMTA208_05445 (recQ)
Messenger RNA biogenesis [BR:
baz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAMTA208_05445 (recQ)
DNA repair and recombination proteins [BR:
baz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAMTA208_05445 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEB23270
LinkDB
All DBs
Position
1093418..1094908
Genome browser
AA seq
496 aa
AA seq
DB search
MTELHKALYRNFGLHSFKKGQEEIITSVLQKKDTIAMLPTGGGKSLCYQLPGYIMDGLVL
IISPLLSLMEDQVQQLKAKGEKRVAALNSMLNSDERHFVLSNISRYKFLYMSPEALSSPY
VLNRLKNVPVSLFVIDEAHCISEWGHDFRPDYSKLGPFRQALGKPPVLALTATATKETLR
DVTDVLGLEHAVRHLYSVNRPNILLAIEHVADNAEKISRVTELAEKLEGPGIVYCPTRKW
AEELAAELNEKTGKRTDYYHGGMDTGDRILIQQQFIHNQLDCICCTNAFGMGVDKSDIRF
VIHFYPPQTAEAFMQEIGRAGRDGSPSVSILLRAPGDTELQQQIIQTESLSDYDLEGILA
VIRDAGTSDERKLRDVLISKGVQETQARTAIHLYLQGKTNKEQLQEELTCRVEKKLHKMN
RFSALLERKECIREALLAYFDESYEPEGPTGQCCSSCGMDLTPYEQKGERKNMERFEDWK
LELDRIFGLESAGEFS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctgcacaaagctttataccggaattttggtttgcattcgtttaaaaaaggg
caggaagaaatcatcaccagcgtgcttcaaaagaaggatacgattgccatgcttccgaca
ggcggggggaaatcattatgctatcagcttccgggttacataatggacgggctggtactg
attatttcacctcttctttcattaatggaagatcaggtgcagcagctgaaagcgaaagga
gaaaagcgggttgcggcattaaacagcatgctgaattctgacgagcggcattttgtcctc
agcaacatcagccgttacaaatttctttatatgtctcctgaagccctctcgtcaccttat
gtgctgaatcgtttgaaaaacgtcccggtcagtttatttgtcattgatgaggctcattgc
atatcagagtggggacatgatttcaggcctgattattcaaagctcggacctttcaggcaa
gcactcggcaagccgcctgtattggcgctgaccgcgacagcgacgaaagaaacgctcagg
gatgtgacggatgtgctcggacttgagcatgcggtgcgccatctatattcggtcaaccgg
ccgaatattctcttggcgattgaacatgtggctgataatgccgaaaaaatcagcagggtc
acagagcttgccgaaaagctcgagggcccgggcatcgtatattgtccgaccagaaaatgg
gcggaagagcttgcggccgagctgaacgaaaaaacgggaaagcggacggattattatcac
gggggaatggatacaggcgacaggatattaattcagcagcaatttatccataaccagctt
gattgcatttgctgcaccaatgcgttcggcatgggtgtggataagtctgatatccgcttt
gttattcatttttatcctccccaaacggccgaggcctttatgcaggaaatcggaagagcg
ggccgcgacggcagcccaagtgtcagtattttgctgagagcgccgggcgataccgagctt
cagcagcagattattcagacagaaagtttgtccgattacgacctggaaggcattctggcc
gtcatacgggacgccggtacaagcgatgagcgaaagcttcgggatgttctgataagcaag
ggcgttcaggaaacacaggcgcgaacggccatccacctgtacctgcaaggaaaaaccaat
aaagagcagctgcaagaagaactgacatgccgcgtggaaaagaagctgcataaaatgaac
cgcttttcggcgttattggagcggaaagaatgtataagagaagcgctattagcttacttt
gatgaatcgtatgagcctgaaggtccaaccgggcaatgctgcagcagctgcggaatggat
ctgaccccatacgagcaaaaaggagaacggaaaaacatggagcggtttgaagattggaag
ctggaattagaccggattttcggtttagagtctgcgggtgagttcagctga
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