Bacillus amyloliquefaciens TA208: BAMTA208_06230
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Entry
BAMTA208_06230 CDS
T01824
Name
(GenBank) putative HU-related DNA-binding protein; phage SPbeta
KO
K03530
DNA-binding protein HU-beta
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baz03032
]
BAMTA208_06230
03036 Chromosome and associated proteins [BR:
baz03036
]
BAMTA208_06230
03400 DNA repair and recombination proteins [BR:
baz03400
]
BAMTA208_06230
DNA replication proteins [BR:
baz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BAMTA208_06230
Chromosome and associated proteins [BR:
baz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BAMTA208_06230
DNA repair and recombination proteins [BR:
baz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BAMTA208_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
DUF2267
HU-HIG
HU-CCDC81_euk_2
VWA_3
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEB23421
LinkDB
All DBs
Position
complement(1232542..1232817)
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AA seq
91 aa
AA seq
DB search
MNKTEFAGAVAEKLGVTKKEATPKVEAVFNVIVETLTKGESIKIPGVGTFEVRERAARKG
RNPKSGEEIDIPATKAPAFKAAKALKDAVKA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaatttgctggagcagttgcagaaaaattaggagttactaagaaagaa
gctacacctaaagtagaagcagtatttaatgtcatcgttgaaacactaacaaaaggtgaa
tcaatcaagattcctggagttggaacatttgaggttcgtgaacgtgcagctcgtaaaggg
agaaatccaaaatcgggtgaggaaattgatattccagctacaaaggcacctgcattcaag
gctgctaaagctctaaaagacgcggtgaaagcttaa
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