Bacillus amyloliquefaciens TA208: BAMTA208_08810
Help
Entry
BAMTA208_08810 CDS
T01824
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
baz
Bacillus amyloliquefaciens TA208
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
baz03016
]
BAMTA208_08810 (truB)
Enzymes [BR:
baz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BAMTA208_08810 (truB)
Transfer RNA biogenesis [BR:
baz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BAMTA208_08810 (truB)
Prokaryotic type
BAMTA208_08810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEB23931
LinkDB
All DBs
Position
complement(1743704..1744633)
Genome browser
AA seq
309 aa
AA seq
DB search
MVNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICVGRATKIVEYV
TDKSKTYDAEITLGFSTSTEDQTGETVSVKPVKEPINETDIKAVLDELKGPQEQVPPMYS
AVKVNGKKLYEYARAGIEVERPKRNITIEDISLTSPVTYTDDTASFRFTVTCSKGTYVRT
LAVTIGEKLGYPAHMSHLIRTASGDFSLDECFTFDELEQQASDGTVAEHAVPIERALNHL
PKWVISDTLAKKAENGSVFDIPAEFSAMTADARIAVCTEAGECVAIYMPHPSKKGLLKPA
KVLMQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttaacggagttctccttttacataaaccggtcggcatgacttctcacgactgtgta
atgaaaataagaaaactgttaaaaacaaagaaagtcggtcatacgggcacacttgatccg
gaagtgtcaggcgtactgccgatctgtgtcggacgggccacaaagatcgttgagtacgtt
accgacaagtcaaaaacgtacgatgctgagatcactctcggcttctccacctcgactgaa
gatcagacgggggaaaccgtcagcgtaaaacctgtcaaggagccgataaatgaaacggac
atcaaagccgttttagacgaactaaagggaccgcaggagcaagtgccgccgatgtattcc
gcggtgaaggtgaacgggaaaaagctctatgaatacgcccgagcgggtattgaagtggag
cggccgaagcggaatatcacgattgaagatatctccctcacttcacctgtcacttatacg
gatgatacagcgtcattccgcttcacagtcacgtgctcaaaagggacttacgtcagaaca
ttggcagtgacaatcggtgaaaagctcggctatcccgcgcatatgtcgcatcttatccgg
actgcttccggcgatttcagccttgatgagtgtttcacgtttgatgagcttgagcagcag
gcttcagacggcacggttgcagagcatgcggtgccgattgaaagagcgctcaatcatttg
ccgaaatgggtcataagtgatacattagctaagaaagctgaaaacgggtcagtgtttgac
atcccggctgaattttctgcaatgacagctgacgcccgtatagcggtctgtaccgaagcc
ggagaatgtgtggccatttatatgccgcacccttcaaaaaaaggactgctgaaaccggct
aaagtgctgatgcaaaaaagcgaacaataa
DBGET
integrated database retrieval system
