Bacillus amyloliquefaciens TA208: BAMTA208_08850
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Entry
BAMTA208_08850 CDS
T01824
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
baz
Bacillus amyloliquefaciens TA208
Pathway
baz03030
DNA replication
baz03430
Mismatch repair
baz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
baz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAMTA208_08850 (polC)
03430 Mismatch repair
BAMTA208_08850 (polC)
03440 Homologous recombination
BAMTA208_08850 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
baz03032
]
BAMTA208_08850 (polC)
03400 DNA repair and recombination proteins [BR:
baz03400
]
BAMTA208_08850 (polC)
Enzymes [BR:
baz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAMTA208_08850 (polC)
DNA replication proteins [BR:
baz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAMTA208_08850 (polC)
DNA repair and recombination proteins [BR:
baz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAMTA208_08850 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DEDDh_C
HHH_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AEB23939
LinkDB
All DBs
Position
complement(1750002..1754315)
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQLNMTDDTFMTYFEDGEIDKLTIHKAEKAWHFQFRFKALLPYQI
YDSFMMRLTQSFAHIARVTSSIQVIDPSVSEELVQDYWTRCIEELEGTSPPMVALLNQQK
PKLKGNKLIVKTKTDTEASALKNKYSALIQHSYRQFGFPELQLDTEIFVSDQEVQKFREQ
KLAEDQERAMQALIEMEKKEKEGDEDQTPSGPLVIGYQIKENEEIRTLDSIMDEERRITV
QGYVFDAETRELKSGRTLCIFKITDYTNSILVKMFAREKEDAALMKTLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDTAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANIVDDGVPIAYNPAHRLLEEDT
YVVFDVETTGLSAVYDTIIELAAVKIRGGEIIDKFEAFANPHHPLSATTIELTGITDDMV
RDAPDVVDVVRDFKEWIGDDVLVAHNASFDMGFLNVAYKRLLKTEKAKNPVIDTLELARF
LYPEFKNHRLNTLCKKFDIELTQHHRAVFDAEATGYLLLKMLKDAAEKDIFYHDQLNENM
GQSNAYQRSRPYHATLLAVNETGLKNLFKLVSISHIQYFYRVPRIPRSQLDKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLQLELVRDEKALKEIITNI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILVSSQGGANPLNRHELPKVHFRTTDEMLDA
FSFLGAEKAKEIVVENTQKVASMIEEIKPIKDDLYTPKIDGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLAPHYVCPSCRYSEFFNDGSVGSGFDLPDKSCPSCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPHAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDHNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNTCELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKKNNVPNWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMDD
ISSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSASEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaagacagtttcagattcttctgcagcagcttaatatg
acagatgataccttcatgacatactttgaagatggagagattgataaactgacaatccat
aaagcagaaaaggcctggcatttccaatttcgcttcaaggctcttttgccgtatcaaata
tatgattcattcatgatgaggttaacacaatcgtttgctcacatcgcccgtgtcacatca
tccattcaagtcattgaccctagcgtgtcagaggagcttgtacaggattattggacgcgc
tgtatcgaagagcttgaaggaacctcgccgccgatggtggcccttttgaatcagcagaag
ccgaagctcaagggaaacaagctgatcgtgaaaacaaagacggatacagaagcatcggcg
ctcaaaaataaatacagcgcactgattcagcacagctatcgccaattcggctttcctgaa
ctgcagctggataccgaaattttcgtgtctgaccaagaagttcagaaattccgcgagcaa
aagcttgctgaagatcaggagcgggcgatgcaggcgcttatcgaaatggagaagaaggaa
aaagagggcgatgaggatcagacgccatccggaccgcttgtcatcggctatcaaattaaa
gagaacgaagaaatccggacgcttgacagcatcatggatgaagaaagaagaatcacggtg
cagggctatgtgtttgatgctgaaacacgcgagctgaaaagcggacggacgctctgtatt
ttcaaaattacggattatacaaacagtattctagtgaaaatgtttgcaagagaaaaagaa
gacgccgccctcatgaaaacactgaaaaaaggcatgtgggtgaaagcgcggggaagcatc
caaaacgatacattcgtcagagacctcgtcatgattgcaaatgacgtgaatgaaataaaa
gccaaaacccgggaagacaccgctcctgaaggcgaaaaacgggtagagcttcatctgcat
tctccgatgagccaaatggacgccgtaacgggcatcggaaagcttgtcgaacaggcgaaa
aaatggggacacgaagcgattgcgttaactgatcatgccgtcgtgcagtccttcccggat
gcatattccgccgcgaaaaagcacggtattaaaatgatttacggaatggaagccaatatc
gtagatgacggcgttccgatcgcatacaatcccgctcaccgtcttctggaagaagacaca
tatgtcgtctttgacgttgaaacgacgggtctgtcagcagtgtatgacaccatcattgag
cttgcggcagtcaaaataagaggcggagaaatcattgataaattcgaagcgttcgccaat
ccgcaccaccctctgtcagcaacgacgatagagctcaccggaattacggatgacatggtc
cgcgacgcgcccgatgtcgttgacgttgtcagggattttaaagaatggatcggcgatgat
gtgctagtggctcacaacgccagctttgatatgggatttttaaatgtagcgtataagcgc
cttttgaaaaccgaaaaagcgaaaaatccggtcattgatacgctggaactcgcgcgtttc
ctgtatcctgaatttaaaaatcaccgcttaaatacgttatgtaagaagtttgatatcgaa
ttaacccagcaccaccgagcggtctttgacgctgaagcaacaggatatctgctgttaaaa
atgctcaaagacgcggctgaaaaagatattttttatcatgatcagctgaatgagaatatg
ggacaatccaatgcttaccaaagatcaaggccttatcacgctacattgcttgccgtgaat
gagaccggcttgaaaaatctgtttaagctcgtgtccatttctcatattcaatatttctac
agagtgccgcgcattccaaggtcgcagcttgataaatacagagaaggcctgttaatcggt
tctgcctgtgacaggggagaggtctttgaaggcatgatgcaaaaatcacctgaagaggtt
gaagatatcgcatctttctatgactatcttgaagtgcagccgccggaagtatacaggcac
cttctgcagcttgagctcgtccgggatgaaaaagcgctgaaagaaattatcacaaacatt
acgaagctcggggaaaaactgaataagccggtcgttgcgacaggaaatgtccactattta
aacgatgaggataaaatttaccggaagatcttagtttcttctcaaggcggcgccaacccg
ttaaacagacatgaactgcctaaagtgcatttcagaacgacagatgaaatgctggatgct
ttctcctttctgggtgcggaaaaagcgaaagaaatcgtggttgagaatacacaaaaagtc
gcttccatgatcgaagagatcaaaccgattaaagacgacctgtacacgccgaaaattgac
ggagccgatgaagaaatccgtgaaatgagctatcagcgcgccagaagcatttacggtgaa
gagcttcctgaaattgttgaagcgagaatagagaaagaattaaaaagcatcatcggccat
ggattcgccgttatatatctcatttctcataagcttgtaaaacggtctctggatgacggc
tatctcgtcggctcccggggatccgtcggttcatcacttgtggcgactttaacggaaatc
actgaagtgaacccgctcgctccgcactatgtgtgcccgagctgccggtattccgaattc
tttaatgacggatccgtcggttccggttttgaccttccggataaaagctgcccgtcttgc
ggcactcctttgaaaaaggacggacacgatatcccgtttgaaacgttcttaggcttcaaa
ggcgataaagtacccgatatcgacttgaacttctcaggtgagtatcagccgcatgcgcat
aactacacgaaagtgctgttcggtgaagataatgtttaccgtgcgggaacgatcggcacc
gttgcggaaaagacggcttacggatatgtgaaaggctatgcgggcgaccacaaccttcac
atgcgcggcgctgaaatcgaccgcctcgtacagggctgcaccggtgttaagagaacgacc
ggccagcacccggggggcattatcgttgtgcctgattatatggatatttacgatttttca
ccgattcaattcccggctgatgcgacgggttctgaatggaaaacaactcactttgacttc
cactccattcatgacaacctgctgaagcttgatatattaggacacgatgatccgacagtc
atccggatgctccaggatttaagcggaattgatccgaagacgattccgacggatgatcct
gaggttatgaagattttccaagggacagaatcactcggcgtcactgaagagcagatcggc
tgcaaaacggggacgctcggcattcctgaattcgggacgcgatttgtgcggcagatgctc
gaagatacgaagccgacgacgttctctgagcttgttcagatttccgggctttctcacggg
actgacgtatggctcggcaatgcgcaggaactgatacacaacaatacgtgtgaactgagc
gaagtgatcggctgccgcgatgacatcatggtttatttgatctatcagggccttgagcct
tcactggcctttaaaatcatggaatttgtccgtaaaggcaaaggcctgacgccggaatgg
gaagaagaaatgaaaaagaacaatgtgccgaactggtatattgattcatgcaaaaaaatc
aaatacatgttcccgaaagcccacgccgccgcatatgtgttaatggcggtacggattgca
tactttaaagtgcatcacgcgcttttatactatgctgcgtattttaccgtacgtgccgat
gactttgacattgatacgatgattaaaggctcgactgccatcagggcggttatggatgat
atcagctctaaagggcttgatgcttcgccgaaggaaaaaaacctccttaccgtgttagag
cttgcgcttgaaatgtgtgaacgcggctattccttccagaaggtcgatctataccgttca
agcgcttcggaatttatcattgacggcaacagtctgatcccgccgttcaactcaattccg
ggtctcggaaccaacgccgctctcaatattgtaaaagcgcgggaagaaggagagttcctt
tcaaaagaagaccttcaaaaacgcggaaaagtgtcaaaaaccattttagagtatttagac
cgccacggctgtctggagtcgcttccggaccaaaaccagctgtcactgttttaa
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